LOC_Os04g39700 (Os04g0473400)


Aliases : Os04g0473400

Description : 29.2.1.2.2.6 protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L6 Ribosomal protein L6 family protein


Gene families : OG_01_0002352 (Gene family) Phylogenetic Tree(s): OG0002352_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os04g39700
Cluster HCCA cluster: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
AT1G18540 No alias Ribosomal protein L6 family protein 0.35 Gene family
AT1G74050 No alias Ribosomal protein L6 family protein 0.07 Gene family
AT1G74060 No alias Ribosomal protein L6 family protein 0.18 Gene family
Cpa|evm.model.tig00021127.127 No alias 29.2.1.2.2.6 protein.synthesis.ribosomal... 0.21 Gene family
Cre01.g011000 No alias 29.2.1.2.2.6 protein.synthesis.ribosomal... 0.21 Gene family
GSVIVT01032041001 No alias 29.2.1.2.2.6 protein.synthesis.ribosomal... 0.17 Gene family
GSVIVT01033532001 No alias 29.2.1.2.2.6 protein.synthesis.ribosomal... 0.19 Gene family
MA_108607g0010 No alias 29.2.1.2.2.6 protein.synthesis.ribosomal... 0.1 Gene family
MA_807054g0010 No alias 29.2.1.2.2.6 protein.synthesis.ribosomal... 0.02 Gene family
Smo270686 PACid_15421830 29.2.1.2.2.6 protein.synthesis.ribosomal... 0.17 Gene family
Solyc04g014720.3.1 Solyc04g014720.3 29.2.1.2.2.6 protein.synthesis.ribosomal... 0.13 Gene family
Solyc05g054070.3.1 Solyc05g054070.3 29.2.1.2.2.6 protein.synthesis.ribosomal... 0.15 Gene family
Solyc11g012110.2.1 Solyc11g012110.2 29.2.1.2.2.6 protein.synthesis.ribosomal... 0.18 Gene family
Zm00001d017047 GRMZM2G003384 29.2.1.2.2.6 protein.synthesis.ribosomal... 0.32 Gene family
Zm00001d050920 GRMZM2G008748 29.2.1.2.2.6 protein.synthesis.ribosomal... 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan
CC GO:0005622 intracellular IEA InterProScan
CC GO:0005840 ribosome IEA InterProScan
BP GO:0006412 translation IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000915 60S_ribosomal_L6E 115 222
No external refs found!