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  5. Mp3g20870.1

Mp3g20870.1


Description : transcription factor (Trihelix)


Gene families : OG0001890 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001890_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp3g20870.1
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
Aob_g21090 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene07938.t1 Aspi01Gene07938 Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g05886 No alias Trihelix-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g00515 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os02g47370.1 LOC_Os02g47370 transcription factor (Trihelix) 0.02 OrthoFinder output from all 47 species
Smo79941 No alias RNA biosynthesis.transcriptional activation.Trihelix... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP HCCA
MF GO:0008417 fucosyltransferase activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0042546 cell wall biogenesis IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA

No InterPro domains available for this sequence

No external refs found!