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  5. Mp5g23340.1

Mp5g23340.1


Description : ALADIN scaffold nucleoporin of nuclear pore complex


Gene families : OG_01_0004325 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004325_tree ,
OG_02_0004827 (LandPlants) Phylogenetic Tree(s): OG_02_0004827_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp5g23340.1
Cluster HCCA: Cluster_154

Target Alias Description ECC score Gene Family Method Actions
AT3G56900 No alias Transducin/WD40 repeat-like superfamily protein 0.02 Archaeplastida
Cre10.g466300 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.04 Archaeplastida
Gb_13199 No alias ALADIN scaffold nucleoporin of nuclear pore complex 0.02 Archaeplastida
LOC_Os12g03540.1 No alias ALADIN scaffold nucleoporin of nuclear pore complex 0.05 Archaeplastida
Pp3c11_18220V3.1 No alias Transducin/WD40 repeat-like superfamily protein 0.05 Archaeplastida
Solyc08g016801.1.1 No alias ALADIN scaffold nucleoporin of nuclear pore complex 0.06 Archaeplastida
Solyc08g036600.3.1 No alias ALADIN scaffold nucleoporin of nuclear pore complex 0.03 Archaeplastida
AT3G56900 No alias Transducin/WD40 repeat-like superfamily protein 0.02 LandPlants
Gb_13199 No alias ALADIN scaffold nucleoporin of nuclear pore complex 0.02 LandPlants
LOC_Os11g03794.1 No alias ALADIN scaffold nucleoporin of nuclear pore complex 0.02 LandPlants
LOC_Os12g03540.1 No alias ALADIN scaffold nucleoporin of nuclear pore complex 0.05 LandPlants
Pp3c11_18220V3.1 No alias Transducin/WD40 repeat-like superfamily protein 0.05 LandPlants
Solyc08g016801.1.1 No alias ALADIN scaffold nucleoporin of nuclear pore complex 0.05 LandPlants
Solyc08g036600.3.1 No alias ALADIN scaffold nucleoporin of nuclear pore complex 0.03 LandPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001680 WD40_repeat 248 276
No external refs found!