LOC_Os04g39430 (Os04g0469800)

Aliases : Os04g0469800

Description : hormone metabolism.brassinosteroid.synthesis-degradation.BRs.DWF4 Encodes a 22&#945 hydroxylase whose reaction is a rate-limiting step in brassinosteroid biosynthetic pathway. The protein is a member of CYP90B gene family. CLM is an epi-allele with small, compressed rosette, reduced internode length, and reduced fertility, appears in selfed ddm mutant plants possibly due to loss of cytosine methylation. Transcripts accumulate in actively growing tissues, and GUS expression is negatively regulated by brassinosteroids. Localized in the endoplasmic reticulum. The in vitro expressed protein can perform the C-22 hydroxylation of a variety of C27-, C28- and C29-sterols. Cholesterol was the best substrate, followed by campesterol. Sitosterol was a poor substrate. DWARF 4 (DWF4)

Gene families : OG_01_0000009 (Gene family) Phylogenetic Tree(s): OG0000009_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os04g39430
Cluster HCCA cluster: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01018857001 No alias No description available 0.01 Gene family
GSVIVT01037625001 No alias 26.10 misc.cytochrome P450 member of CYP716A "cytochrome... 0.06 Gene family
LOC_Os07g33540 No alias 26.10 misc.cytochrome P450 member of CYP716A "cytochrome... 0.02 Gene family
LOC_Os07g33610 Os07g0520100 26.10 misc.cytochrome P450 member of CYP716A "cytochrome... 0.02 Gene family
LOC_Os10g23130 Os10g0378000 26.10 misc.cytochrome P450 member of CYP708A "cytochrome... 0.02 Gene family
LOC_Os12g18820 Os12g0286300 26.10 misc.cytochrome P450 encodes a protein with... 0.02 Gene family
Zm00001d021639 GRMZM2G180082 26.10 misc.cytochrome P450 member of CYP716A "cytochrome... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEA InterProScan
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA InterProScan
MF GO:0020037 heme binding IEA InterProScan
BP GO:0055114 oxidation-reduction process IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001128 Cyt_P450 36 460
No external refs found!