Mp3g19670.1

Description : transcription factor (BBX-CO)

Gene families : OG0001051 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001051_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Mp3g19670.1

Target	Alias	Description	ECC score	Gene Family Method
GSVIVT01003983001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.03	OrthoFinder output from all 47 species
GSVIVT01024661001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0152.g023452	No alias	BBX class-III transcription factor & original...	0.02	OrthoFinder output from all 47 species
Sam_g34850	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Solyc04g007210.3.1	Solyc04g007210	transcription factor (BBX-CO)	0.02	OrthoFinder output from all 47 species
Solyc05g009310.3.1	Solyc05g009310	transcription factor (BBX-CO)	0.03	OrthoFinder output from all 47 species
Zm00001e005433_P002	Zm00001e005433	transcription factor (BBX-CO)	0.03	OrthoFinder output from all 47 species
Zm00001e012194_P001	Zm00001e012194	transcription factor (BBX-CO)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000315	Znf_B-box	27	69
IPR010402	CCT_domain	351	393

External Links

No external refs found!