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  5. Mp3g16960.1

Mp3g16960.1


Description : RopGEF guanine nucleotide exchange factor (SWAP70)


Gene families : OG0002746 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002746_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp3g16960.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00118010 evm_27.TU.AmTr_v1... Multi-process regulation.Rop GTPase regulatory... 0.02 OrthoFinder output from all 47 species
Adi_g042069 No alias RopGEF guanine nucleotide exchange factor *(SWAP70) &... 0.02 OrthoFinder output from all 47 species
Adi_g080743 No alias RopGEF guanine nucleotide exchange factor *(SWAP70) &... 0.01 OrthoFinder output from all 47 species
Dac_g04638 No alias RopGEF guanine nucleotide exchange factor *(SWAP70) &... 0.03 OrthoFinder output from all 47 species
Dac_g09944 No alias RopGEF guanine nucleotide exchange factor *(SWAP70) &... 0.01 OrthoFinder output from all 47 species
Gb_18894 No alias RopGEF guanine nucleotide exchange factor (SWAP70) 0.01 OrthoFinder output from all 47 species
LOC_Os03g46340.1 LOC_Os03g46340 RopGEF guanine nucleotide exchange factor (SWAP70) 0.02 OrthoFinder output from all 47 species
Lfl_g03954 No alias RopGEF guanine nucleotide exchange factor *(SWAP70) &... 0.02 OrthoFinder output from all 47 species
Ppi_g40455 No alias RopGEF guanine nucleotide exchange factor *(SWAP70) &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004298 threonine-type endopeptidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005681 spliceosomal complex IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006476 protein deacetylation IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
MF GO:0008312 7S RNA binding IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016575 histone deacetylation IEP HCCA
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
BP GO:0035601 protein deacylation IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
CC GO:0048500 signal recognition particle IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
MF GO:0070003 threonine-type peptidase activity IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
BP GO:0098732 macromolecule deacylation IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR001849 PH_domain 39 139
No external refs found!