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  5. Mp3g12050.1

Mp3g12050.1 (ATRABA4C, RABA4C, SMG1)


Aliases : ATRABA4C, RABA4C, SMG1

Description : A-class RAB GTPase


Gene families : OG0001718 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001718_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp3g12050.1

Target Alias Description ECC score Gene Family Method Actions
AT3G12160 RABA4D, ATRABA4D RAB GTPase homolog A4D 0.02 OrthoFinder output from all 47 species
Adi_g111275 RABA4D, ATRABA4D A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os06g50060.1 RABA3, ATRAB-A3,... A-class RAB GTPase 0.03 OrthoFinder output from all 47 species
LOC_Os09g10940.1 ATRABA4C,... A-class RAB GTPase 0.02 OrthoFinder output from all 47 species
MA_59492g0010 RABA4D, ATRABA4D A-class RAB GTPase 0.02 OrthoFinder output from all 47 species
Msp_g01882 RABA4D, ATRABA4D A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g22760 RABA4D, ATRABA4D A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g08199 No alias A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Solyc10g079030.2.1 RABA4D,... A-class RAB GTPase 0.03 OrthoFinder output from all 47 species
Solyc11g010100.2.1 AtRABA4a,... A-class RAB GTPase 0.03 OrthoFinder output from all 47 species
Tin_g05833 RABA4D, ATRABA4D A-class RAB GTPase & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e012878_P002 AtRABA4a,... A-class RAB GTPase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006354 DNA-templated transcription elongation IEP HCCA
BP GO:0006368 transcription elongation by RNA polymerase II IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
CC GO:0008023 transcription elongation factor complex IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
CC GO:0070449 elongin complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR001806 Small_GTPase 18 178
No external refs found!