LOC_Os04g38560 (Os04g0458900)


Aliases : Os04g0458900

Description : 10.8.1 cell wall.pectin*esterases.PME Plant invertase/pectin methylesterase inhibitor superfamily


Gene families : OG_01_0000075 (Gene family) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os04g38560
Cluster HCCA cluster: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
AT2G26450 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.11 Gene family
AT3G49220 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Gene family
AT4G33230 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.1 Gene family
AT5G51490 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Gene family
AT5G51500 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Gene family
AT5G53370 ATPMEPCRF, PMEPCRF pectin methylesterase PCR fragment F 0.02 Gene family
GSVIVT01016667001 No alias 10.8.1 cell wall.pectin*esterases.PME encodes a pectin... 0.05 Gene family
GSVIVT01017687001 No alias 10.8.1 cell wall.pectin*esterases.PME Plant... 0.08 Gene family
GSVIVT01028041001 No alias 10.8.99 cell wall.pectin*esterases.misc Plant... 0.02 Gene family
GSVIVT01028264001 No alias 10.8.1 cell wall.pectin*esterases.PME Plant... 0.11 Gene family
GSVIVT01028265001 No alias 10.8.1 cell wall.pectin*esterases.PME Plant... 0.14 Gene family
GSVIVT01031667001 No alias 10.8.99 cell wall.pectin*esterases.misc pectin... 0.02 Gene family
GSVIVT01035108001 No alias 10.8.1 cell wall.pectin*esterases.PME Plant... 0.02 Gene family
LOC_Os01g21034 Os01g0312500 10.8.1 cell wall.pectin*esterases.PME encodes a pectin... 0.03 Gene family
LOC_Os02g54190 Os02g0783000 10.8.1 cell wall.pectin*esterases.PME pectin... 0.02 Gene family
LOC_Os06g09340 Os06g0193200 10.8.1 cell wall.pectin*esterases.PME Plant... 0.02 Gene family
LOC_Os07g47830 Os07g0675100 10.8.1 cell wall.pectin*esterases.PME encodes a pectin... 0.02 Gene family
LOC_Os09g26360 Os09g0433700 10.8.1 cell wall.pectin*esterases.PME Plant... 0.09 Gene family
LOC_Os11g08750 Os11g0192400 10.8.99 cell wall.pectin*esterases.misc Plant... 0.02 Gene family
MA_10434127g0010 No alias 10.8.1 cell wall.pectin*esterases.PME ATPMEPCRB 0.03 Gene family
MA_9367g0020 No alias 10.8.1 cell wall.pectin*esterases.PME encodes a pectin... 0.02 Gene family
Smo114014 PACid_15416093 No description available 0.02 Gene family
Solyc01g057220.3.1 Solyc01g057220.3 10.8.1 cell wall.pectin*esterases.PME Plant... 0.02 Gene family
Solyc01g068120.3.1 Solyc01g068120.3 10.8.1 cell wall.pectin*esterases.PME VGDH1 0.12 Gene family
Solyc01g099960.3.1 Solyc01g099960.3 10.8.1 cell wall.pectin*esterases.PME Plant... 0.1 Gene family
Solyc03g083840.3.1 Solyc03g083840.3 10.8.99 cell wall.pectin*esterases.misc Plant... 0.02 Gene family
Solyc03g083870.3.1 Solyc03g083870.3 10.8.99 cell wall.pectin*esterases.misc Plant... 0.03 Gene family
Solyc03g123620.4.1 Solyc03g123620.4 10.8.1 cell wall.pectin*esterases.PME encodes a pectin... 0.03 Gene family
Solyc06g051960.3.1 Solyc06g051960.3 10.8.1 cell wall.pectin*esterases.PME Plant... 0.02 Gene family
Solyc06g084620.1.1 Solyc06g084620.1 10.8.1 cell wall.pectin*esterases.PME VGDH1 0.1 Gene family
Solyc09g075350.3.1 Solyc09g075350.3 10.8.99 cell wall.pectin*esterases.misc Plant... 0.03 Gene family
Zm00001d003431 GRMZM2G012328 10.8.1 cell wall.pectin*esterases.PME Plant... 0.05 Gene family
Zm00001d005792 GRMZM2G060400 10.8.1 cell wall.pectin*esterases.PME Plant... 0.12 Gene family
Zm00001d020586 GRMZM2G137676 10.8.1 cell wall.pectin*esterases.PME Plant... 0.17 Gene family
Zm00001d025588 GRMZM2G125356 10.8.1 cell wall.pectin*esterases.PME Encodes a putative... 0.19 Gene family
Zm00001d032100 GRMZM2G043415 10.8.1 cell wall.pectin*esterases.PME Plant... 0.22 Gene family

Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 256 551
IPR006501 Pectinesterase_inhib_dom 51 197
No external refs found!