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  5. Mp3g09480.1

Mp3g09480.1


Description : no hits & (original description: none)


Gene families : OG0004724 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004724_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp3g09480.1

Target Alias Description ECC score Gene Family Method Actions
AT1G50620 No alias RING/FYVE/PHD zinc finger superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g009864 No alias SMARCF component *(LFR) of SWI/SNF chromatin remodeling... 0.02 OrthoFinder output from all 47 species
Ala_g13563 No alias SMARCF component *(LFR) of SWI/SNF chromatin remodeling... 0.02 OrthoFinder output from all 47 species
Ceric.14G064400.1 Ceric.14G064400 SMARCF component *(LFR) of SWI/SNF chromatin remodeling... 0.05 OrthoFinder output from all 47 species
Dcu_g48293 No alias SMARCF component *(LFR) of SWI/SNF chromatin remodeling... 0.04 OrthoFinder output from all 47 species
GSVIVT01037731001 No alias No description available 0.02 OrthoFinder output from all 47 species
MA_10430947g0010 No alias PHD finger protein At3g20280 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
Ore_g36191 No alias SMARCF component *(LFR) of SWI/SNF chromatin remodeling... 0.02 OrthoFinder output from all 47 species
Pir_g01055 No alias SMARCF component *(LFR) of SWI/SNF chromatin remodeling... 0.03 OrthoFinder output from all 47 species
Pp3c24_16720V3.1 Pp3c24_16720 RING/FYVE/PHD zinc finger superfamily protein 0.02 OrthoFinder output from all 47 species
Spa_g09424 No alias SMARCF component *(LFR) of SWI/SNF chromatin remodeling... 0.05 OrthoFinder output from all 47 species
Tin_g29140 No alias SMARCF component *(LFR) of SWI/SNF chromaTin remodeling... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
MF GO:0060090 molecular adaptor activity IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
InterPro domains Description Start Stop
IPR019787 Znf_PHD-finger 559 607
IPR001025 BAH_dom 838 967
No external refs found!