Mp3g08120.1 (MCM5)

Aliases : MCM5

Description : component MCM5 of MCM replicative DNA helicase complex

Gene families : OG0006960 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006960_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Mp3g08120.1
Cluster	HCCA: Cluster_20

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00026p00049360	MCM5,...	Cell cycle.interphase.DNA replication.preinitiation.MCM...	0.07	OrthoFinder output from all 47 species
AT2G07690	MCM5	Minichromosome maintenance (MCM2/3/5) family protein	0.16	OrthoFinder output from all 47 species
Ala_g32000	MCM5	component *(MCM5) of MCM replicative DNA helicase...	0.1	OrthoFinder output from all 47 species
Als_g01075	MCM5	component *(MCM5) of MCM replicative DNA helicase...	0.06	OrthoFinder output from all 47 species
Aop_g14370	MCM5	component *(MCM5) of MCM replicative DNA helicase...	0.16	OrthoFinder output from all 47 species
Aspi01Gene34859.t1	MCM5, Aspi01Gene34859	component *(MCM5) of MCM replicative DNA helicase...	0.08	OrthoFinder output from all 47 species
Azfi_s0083.g038881	MCM5	component *(MCM5) of MCM replicative DNA helicase...	0.12	OrthoFinder output from all 47 species
Ceric.25G009500.1	MCM5, Ceric.25G009500	component *(MCM5) of MCM replicative DNA helicase...	0.25	OrthoFinder output from all 47 species
Cre01.g023150	MCM5	Cell cycle.interphase.DNA replication.preinitiation.MCM...	0.05	OrthoFinder output from all 47 species
Dac_g15442	MCM5	component *(MCM5) of MCM replicative DNA helicase...	0.12	OrthoFinder output from all 47 species
Dcu_g06401	MCM5	component *(MCM5) of MCM replicative DNA helicase...	0.17	OrthoFinder output from all 47 species
GSVIVT01001046001	MCM5	Cell cycle.interphase.DNA replication.preinitiation.MCM...	0.18	OrthoFinder output from all 47 species
Gb_09107	MCM5	DNA replication licensing factor MCM5 OS=Oryza sativa...	0.13	OrthoFinder output from all 47 species
LOC_Os02g55410.1	MCM5, LOC_Os02g55410	component MCM5 of MCM replicative DNA helicase complex	0.16	OrthoFinder output from all 47 species
Len_g03362	MCM5	component *(MCM5) of MCM replicative DNA helicase...	0.14	OrthoFinder output from all 47 species
Lfl_g19529	MCM5	component *(MCM5) of MCM replicative DNA helicase...	0.08	OrthoFinder output from all 47 species
MA_10426777g0010	MCM5	component MCM5 of MCM replicative DNA helicase complex	0.19	OrthoFinder output from all 47 species
Msp_g01667	MCM5	component *(MCM5) of MCM replicative DNA helicase...	0.1	OrthoFinder output from all 47 species
Nbi_g01162	MCM5	component *(MCM5) of MCM replicative DNA helicase...	0.05	OrthoFinder output from all 47 species
Ppi_g03897	MCM5	component *(MCM5) of MCM replicative DNA helicase...	0.11	OrthoFinder output from all 47 species
Sam_g09702	No alias	component *(MCM5) of MCM replicative DNA helicase...	0.1	OrthoFinder output from all 47 species
Smo88878	MCM5	Cell cycle.interphase.DNA replication.preinitiation.MCM...	0.05	OrthoFinder output from all 47 species
Solyc07g005020.3.1	MCM5, Solyc07g005020	component MCM5 of MCM replicative DNA helicase complex	0.17	OrthoFinder output from all 47 species
Spa_g08592	MCM5	component *(MCM5) of MCM replicative DNA helicase...	0.14	OrthoFinder output from all 47 species
Spa_g08593	MCM5	component *(MCM5) of MCM replicative DNA helicase...	0.12	OrthoFinder output from all 47 species
Spa_g45329	MCM5	component *(MCM5) of MCM replicative DNA helicase...	0.02	OrthoFinder output from all 47 species
Tin_g06768	MCM5	component *(MCM5) of MCM replicative DNA helicase...	0.17	OrthoFinder output from all 47 species
Zm00001e016127_P001	MCM5, Zm00001e016127	component MCM5 of MCM replicative DNA helicase complex	0.13	OrthoFinder output from all 47 species
Zm00001e023682_P001	MCM5, Zm00001e023682	DNA replication licensing factor MCM5 OS=Oryza sativa...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006270	DNA replication initiation	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000278	mitotic cell cycle	IEP	HCCA
CC	GO:0000775	chromosome, centromeric region	IEP	HCCA
CC	GO:0000796	condensin complex	IEP	HCCA
CC	GO:0000808	origin recognition complex	IEP	HCCA
MF	GO:0004748	ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor	IEP	HCCA
CC	GO:0005575	cellular_component	IEP	HCCA
CC	GO:0005634	nucleus	IEP	HCCA
CC	GO:0005664	nuclear origin of replication recognition complex	IEP	HCCA
BP	GO:0006260	DNA replication	IEP	HCCA
BP	GO:0007049	cell cycle	IEP	HCCA
BP	GO:0007076	mitotic chromosome condensation	IEP	HCCA
BP	GO:0010639	negative regulation of organelle organization	IEP	HCCA
MF	GO:0016725	oxidoreductase activity, acting on CH or CH2 groups	IEP	HCCA
MF	GO:0016728	oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor	IEP	HCCA
BP	GO:0022402	cell cycle process	IEP	HCCA
BP	GO:0030261	chromosome condensation	IEP	HCCA
BP	GO:0032780	negative regulation of ATP-dependent activity	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
BP	GO:0033043	regulation of organelle organization	IEP	HCCA
BP	GO:0033044	regulation of chromosome organization	IEP	HCCA
CC	GO:0042555	MCM complex	IEP	HCCA
BP	GO:0043086	negative regulation of catalytic activity	IEP	HCCA
CC	GO:0043226	organelle	IEP	HCCA
CC	GO:0043227	membrane-bounded organelle	IEP	HCCA
CC	GO:0043229	intracellular organelle	IEP	HCCA
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	HCCA
BP	GO:0043462	regulation of ATP-dependent activity	IEP	HCCA
BP	GO:0044092	negative regulation of molecular function	IEP	HCCA
CC	GO:0044815	DNA packaging complex	IEP	HCCA
BP	GO:0048519	negative regulation of biological process	IEP	HCCA
BP	GO:0048523	negative regulation of cellular process	IEP	HCCA
BP	GO:0050790	regulation of catalytic activity	IEP	HCCA
BP	GO:0051095	regulation of helicase activity	IEP	HCCA
BP	GO:0051097	negative regulation of helicase activity	IEP	HCCA
BP	GO:0051128	regulation of cellular component organization	IEP	HCCA
BP	GO:0051129	negative regulation of cellular component organization	IEP	HCCA
BP	GO:0051276	chromosome organization	IEP	HCCA
MF	GO:0061731	ribonucleoside-diphosphate reductase activity	IEP	HCCA
BP	GO:0065009	regulation of molecular function	IEP	HCCA
CC	GO:0098687	chromosomal region	IEP	HCCA
CC	GO:0110165	cellular anatomical entity	IEP	HCCA
BP	GO:1903047	mitotic cell cycle process	IEP	HCCA
BP	GO:1905462	regulation of DNA duplex unwinding	IEP	HCCA
BP	GO:1905463	negative regulation of DNA duplex unwinding	IEP	HCCA
BP	GO:1905774	regulation of DNA helicase activity	IEP	HCCA
BP	GO:1905775	negative regulation of DNA helicase activity	IEP	HCCA
BP	GO:2001251	negative regulation of chromosome organization	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR033762	MCM_OB	135	270
IPR041562	MCM_lid	555	645
IPR001208	MCM_dom	314	536
IPR027925	MCM_N	35	110

External Links

No external refs found!

Mp3g08120.1 (MCM5)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation