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  5. Mp3g06700.1

Mp3g06700.1 (MMD1)


Aliases : MMD1

Description : PHD finger transcription factor


Gene families : OG0003400 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003400_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp3g06700.1
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00138p00035380 MMD1,... RNA biosynthesis.transcriptional activation.PHD finger... 0.02 OrthoFinder output from all 47 species
Ceric.25G054900.1 MMD1, Ceric.25G054900 transcriptional regulator *(MS1) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.32G069100.1 MMD1, Ceric.32G069100 transcriptional regulator *(MS1) & original description:... 0.05 OrthoFinder output from all 47 species
GSVIVT01011588001 MS1 RNA biosynthesis.transcriptional activation.PHD finger... 0.02 OrthoFinder output from all 47 species
GSVIVT01030666001 MMD1 RNA biosynthesis.transcriptional activation.PHD finger... 0.04 OrthoFinder output from all 47 species
LOC_Os09g27620.1 MS1, LOC_Os09g27620 MMD1/DUET meiotic recombination regulating protein. PHD... 0.03 OrthoFinder output from all 47 species
Ore_g40819 MMD1 transcriptional regulator *(MS1) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0105.g020189 MMD1 transcriptional regulator *(MS1) & original description:... 0.03 OrthoFinder output from all 47 species
Solyc04g008420.1.1 MS1, Solyc04g008420 MMD1/DUET meiotic recombination regulating protein. PHD... 0.03 OrthoFinder output from all 47 species
Spa_g50133 MMD1 transcriptional regulator *(MS1) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e034314_P001 MS1, Zm00001e034314 MMD1/DUET meiotic recombination regulating protein. PHD... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005815 microtubule organizing center IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0034453 microtubule anchoring IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!