- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : PVA12
Description : contact site protein (VAP27) of ER-cytoskeleton-plasmamembrane interface
Gene families : OG0000655 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000655_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Mp3g04340.1 | |
| Cluster | HCCA: Cluster_26 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT2G45140 | PVA12 | plant VAP homolog 12 | 0.04 | OrthoFinder output from all 47 species | |
| AT4G00170 | No alias | Plant VAMP (vesicle-associated membrane protein) family protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g058643 | VAP27, VAP27-1,... | contact site protein (VAP27) of... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g080054 | VAP27, VAP27-1,... | contact site protein (VAP27) of... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g085923 | PVA12 | contact site protein (VAP27) of... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g088258 | PVA12 | contact site protein (VAP27) of... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g102804 | PVA12 | contact site protein (VAP27) of... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g102810 | PVA12 | contact site protein (VAP27) of... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g115224 | No alias | contact site protein (VAP27) of... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g37439 | VAP27, VAP27-1,... | contact site protein (VAP27) of... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g62969 | VAP27, VAP27-1,... | contact site protein (VAP27) of... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.31G024900.1 | VAP27, VAP27-1,... | contact site protein (VAP27) of... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.39G059000.1 | VAP27, VAP27-1,... | contact site protein (VAP27) of... | 0.04 | OrthoFinder output from all 47 species | |
| Cre03.g196900 | VAP27, VAP27-1,... | Vesicle-associated protein 1-1 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g07429 | PVA12 | contact site protein (VAP27) of... | 0.06 | OrthoFinder output from all 47 species | |
| Dcu_g06823 | VAP27, VAP27-1,... | contact site protein (VAP27) of... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01027683001 | PVA12 | Vesicle-associated protein 1-2 OS=Arabidopsis thaliana | 0.05 | OrthoFinder output from all 47 species | |
| Gb_28560 | No alias | contact site protein (VAP27) of... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os08g05890.1 | LOC_Os08g05890 | contact site protein (VAP27) of... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os08g06020.1 | PVA12, LOC_Os08g06020 | contact site protein (VAP27) of... | 0.05 | OrthoFinder output from all 47 species | |
| Len_g16909 | VAP27, VAP27-1,... | contact site protein (VAP27) of... | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g00566 | No alias | contact site protein (VAP27) of... | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g10884 | PVA12 | contact site protein (VAP27) of... | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g07912 | VAP27, VAP27-1,... | contact site protein (VAP27) of... | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g10897 | PVA12 | contact site protein (VAP27) of... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc08g007200.4.1 | Solyc08g007200 | contact site protein (VAP27) of... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc08g078000.3.1 | Solyc08g078000 | contact site protein (VAP27) of... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc10g018350.2.1 | PVA12, Solyc10g018350 | contact site protein (VAP27) of... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g06544 | PVA12 | contact site protein (VAP27) of... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g02524 | VAP27, VAP27-1,... | contact site protein (VAP27) of... | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e021734_P002 | PVA12, Zm00001e021734 | contact site protein (VAP27) of... | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0004527 | exonuclease activity | IEP | HCCA |
| MF | GO:0004672 | protein kinase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| CC | GO:0005783 | endoplasmic reticulum | IEP | HCCA |
| BP | GO:0006457 | protein folding | IEP | HCCA |
| BP | GO:0006468 | protein phosphorylation | IEP | HCCA |
| BP | GO:0006793 | phosphorus metabolic process | IEP | HCCA |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0007034 | vacuolar transport | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| MF | GO:0008408 | 3'-5' exonuclease activity | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| MF | GO:0016301 | kinase activity | IEP | HCCA |
| BP | GO:0016310 | phosphorylation | IEP | HCCA |
| MF | GO:0016740 | transferase activity | IEP | HCCA |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0031072 | heat shock protein binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| BP | GO:0036211 | protein modification process | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0043412 | macromolecule modification | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0046907 | intracellular transport | IEP | HCCA |
| MF | GO:0051082 | unfolded protein binding | IEP | HCCA |
| BP | GO:0051641 | cellular localization | IEP | HCCA |
| BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000535 | MSP_dom | 8 | 111 |
| No external refs found! |