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  5. Mp3g01380.1

Mp3g01380.1 (SCC3, ATSCC3)


Aliases : SCC3, ATSCC3

Description : component SCC3 of cohesin regulator complex


Gene families : OG0004065 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004065_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp3g01380.1

Target Alias Description ECC score Gene Family Method Actions
AT2G47980 SCC3, ATSCC3 sister-chromatid cohesion protein 3 0.03 OrthoFinder output from all 47 species
Adi_g059337 SCC3, ATSCC3 component *(SCC3) of cohesin regulator complex &... 0.03 OrthoFinder output from all 47 species
Azfi_s0315.g064312 SCC3, ATSCC3 component *(SCC3) of cohesin regulator complex &... 0.02 OrthoFinder output from all 47 species
Cre17.g736400 No alias Cell cycle.mitosis and meiosis.sister chromatid... 0.02 OrthoFinder output from all 47 species
Dde_g11097 SCC3, ATSCC3 component *(SCC3) of cohesin regulator complex &... 0.02 OrthoFinder output from all 47 species
MA_10426289g0010 SCC3, ATSCC3 Sister-chromatid cohesion protein 3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_77394g0010 SCC3, ATSCC3 component SCC3 of cohesin regulator complex 0.02 OrthoFinder output from all 47 species
Ore_g15148 SCC3, ATSCC3 component *(SCC3) of cohesin regulator complex &... 0.02 OrthoFinder output from all 47 species
Pir_g10942 SCC3, ATSCC3 component *(SCC3) of cohesin regulator complex &... 0.02 OrthoFinder output from all 47 species
Sam_g50912 No alias component *(SCC3) of cohesin regulator complex &... 0.02 OrthoFinder output from all 47 species
Solyc05g026510.4.1 SCC3, ATSCC3,... component SCC3 of cohesin regulator complex 0.05 OrthoFinder output from all 47 species
Spa_g04594 SCC3, ATSCC3 component *(SCC3) of cohesin regulator complex &... 0.04 OrthoFinder output from all 47 species
Tin_g08841 SCC3, ATSCC3 component *(SCC3) of cohesin regulator complex &... 0.02 OrthoFinder output from all 47 species
Zm00001e011344_P004 SCC3, ATSCC3,... component SCC3 of cohesin regulator complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043015 gamma-tubulin binding IEP HCCA
MF GO:0043138 3'-5' DNA helicase activity IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR013721 STAG 170 278
No external refs found!