Mp3g00730.1 (ATRABA5C, ARA4,...)


Aliases : ATRABA5C, ARA4, ARA-4, RABA5C, ATRAB11F

Description : A-class RAB GTPase


Gene families : OG0000247 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000247_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp3g00730.1

Target Alias Description ECC score Gene Family Method Actions
AT1G73640 RABA6a, AtRABA6a RAB GTPase homolog A6A 0.03 OrthoFinder output from all 47 species
Adi_g049633 ATRABA2A,... A-class RAB GTPase & original description: none 0.01 OrthoFinder output from all 47 species
Aev_g04605 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g09261 AtRABA5a, RABA5a A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g18147 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g00746 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g03446 ATRABA5C, ARA4,... A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g02896 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g20651 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g22467 ATRABA5C, ARA4,... A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g41226 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g26391 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020961.97 AtRABA1e, RABA1e Vesicle trafficking.regulation of membrane tethering and... 0.02 OrthoFinder output from all 47 species
Cre03.g189250 ATRABA2A,... Vesicle trafficking.regulation of membrane tethering and... 0.05 OrthoFinder output from all 47 species
Dcu_g03700 ARA-1, ATRABA5E,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08021 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g01270 RABA2b,... A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Gb_37703 ATRABA2A,... A-class RAB GTPase 0.06 OrthoFinder output from all 47 species
LOC_Os05g01480.1 ATRABA2A,... A-class RAB GTPase 0.04 OrthoFinder output from all 47 species
LOC_Os05g20050.1 RAB-A2C,... A-class RAB GTPase 0.02 OrthoFinder output from all 47 species
LOC_Os05g44070.1 ATRABA1B, RAB11,... A-class RAB GTPase 0.03 OrthoFinder output from all 47 species
LOC_Os09g15790.1 AtRABA1f,... A-class RAB GTPase 0.02 OrthoFinder output from all 47 species
Len_g16053 ATRABA5C, ARA4,... A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05986 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g13552 ATRABA2A,... A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g04684 AtRABA5a, RABA5a A-class RAB GTPase & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g15644 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g39855 ARA-1, ATRABA5E,... A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g02331 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g04295 AtRABA5b, RABA5b A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g15960 AtRABA5b, RABA5b A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g16173 AtRABA5d, RABA5d A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g02973 ATRABA2A,... A-class RAB GTPase & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g08198 No alias A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g17396 No alias A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Solyc07g055290.3.1 ATRABA1A, ARA2,... A-class RAB GTPase 0.03 OrthoFinder output from all 47 species
Spa_g07580 AtRABA5a, RABA5a A-class RAB GTPase & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g14805 AtRABA5d, RABA5d A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g27440 ATRABA5C, ARA4,... A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e020213_P001 AtRABA1f,... A-class RAB GTPase 0.03 OrthoFinder output from all 47 species
Zm00001e030680_P001 ATHSGBP, RABA1d,... A-class RAB GTPase 0.03 OrthoFinder output from all 47 species
Zm00001e031368_P002 RAB-A2C,... A-class RAB GTPase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001806 Small_GTPase 15 175
No external refs found!