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  5. Mp2g21830.1

Mp2g21830.1 (GMD1)


Aliases : GMD1

Description : GDP-D-mannose 4,6-dehydratase (MUR1)


Gene families : OG0001979 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001979_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp2g21830.1
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
AT5G66280 GMD1 GDP-D-mannose 4,6-dehydratase 1 0.04 OrthoFinder output from all 47 species
Adi_g108238 GMD1 EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g16780 GMD2, MUR1, MUR_1 EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g10133 GMD1 EC_4.2 carbon-oxygen lyase & original description: none 0.01 OrthoFinder output from all 47 species
Len_g03198 GMD1 EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g05274 GMD2, MUR1, MUR_1 EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g01978 GMD1 EC_4.2 carbon-oxygen lyase & original description: none 0.01 OrthoFinder output from all 47 species
Pnu_g00734 GMD1 EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006121 GMD1 EC_4.2 carbon-oxygen lyase & original description: CDS=127-1179 0.02 OrthoFinder output from all 47 species
Smo99252 GMD1 Carbohydrate metabolism.nucleotide sugar... 0.04 OrthoFinder output from all 47 species
Zm00001e036558_P001 GMD2, MUR1,... GDP-D-mannose 4,6-dehydratase (MUR1) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
InterPro domains Description Start Stop
IPR016040 NAD(P)-bd_dom 16 330
No external refs found!