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  5. Mp2g21400.1

Mp2g21400.1


Description : Transcription elongation factor 1 homolog OS=Oryza sativa subsp. japonica (sp|q8lhp0|elof1_orysj : 118.0)


Gene families : OG0004393 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004393_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp2g21400.1
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
Ala_g05578 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cre17.g702550 No alias No description available 0.02 OrthoFinder output from all 47 species
Ehy_g29064 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01014257001 No alias Transcription elongation factor 1 homolog OS=Oryza... 0.02 OrthoFinder output from all 47 species
GSVIVT01021139001 No alias Transcription elongation factor 1 homolog OS=Oryza... 0.02 OrthoFinder output from all 47 species
Gb_13407 No alias Transcription elongation factor 1 homolog OS=Oryza... 0.02 OrthoFinder output from all 47 species
Gb_16585 No alias Transcription elongation factor 1 homolog OS=Oryza... 0.02 OrthoFinder output from all 47 species
LOC_Os07g43730.1 LOC_Os07g43730 Transcription elongation factor 1 homolog OS=Oryza... 0.02 OrthoFinder output from all 47 species
Ore_g14930 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g18065 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc10g008870.3.1 Solyc10g008870 Transcription elongation factor 1 homolog OS=Oryza... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
CC GO:0000152 nuclear ubiquitin ligase complex IEP HCCA
MF GO:0004061 arylformamidase activity IEP HCCA
CC GO:0005680 anaphase-promoting complex IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006568 tryptophan metabolic process IEP HCCA
BP GO:0006569 tryptophan catabolic process IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006586 indolalkylamine metabolic process IEP HCCA
BP GO:0007088 regulation of mitotic nuclear division IEP HCCA
BP GO:0007346 regulation of mitotic cell cycle IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0009063 amino acid catabolic process IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009074 aromatic amino acid family catabolic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010564 regulation of cell cycle process IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0010965 regulation of mitotic sister chromatid separation IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0019441 tryptophan catabolic process to kynurenine IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
BP GO:0030071 regulation of mitotic metaphase/anaphase transition IEP HCCA
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP HCCA
BP GO:0033043 regulation of organelle organization IEP HCCA
BP GO:0033044 regulation of chromosome organization IEP HCCA
BP GO:0033045 regulation of sister chromatid segregation IEP HCCA
BP GO:0033047 regulation of mitotic sister chromatid segregation IEP HCCA
BP GO:0042180 cellular ketone metabolic process IEP HCCA
BP GO:0042430 indole-containing compound metabolic process IEP HCCA
BP GO:0042436 indole-containing compound catabolic process IEP HCCA
BP GO:0042537 benzene-containing compound metabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:0051783 regulation of nuclear division IEP HCCA
BP GO:0051983 regulation of chromosome segregation IEP HCCA
BP GO:0070189 kynurenine metabolic process IEP HCCA
BP GO:0090231 regulation of spindle checkpoint IEP HCCA
BP GO:0090266 regulation of mitotic cell cycle spindle assembly checkpoint IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901606 alpha-amino acid catabolic process IEP HCCA
BP GO:1901976 regulation of cell cycle checkpoint IEP HCCA
BP GO:1901987 regulation of cell cycle phase transition IEP HCCA
BP GO:1901990 regulation of mitotic cell cycle phase transition IEP HCCA
BP GO:1902099 regulation of metaphase/anaphase transition of cell cycle IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA
BP GO:1903504 regulation of mitotic spindle checkpoint IEP HCCA
BP GO:1905818 regulation of chromosome separation IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR007808 Elf1 2 77
No external refs found!