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  5. Mp2g18320.1

Mp2g18320.1 (UVR1, UVH3)


Aliases : UVR1, UVH3

Description : DNA repair endonuclease (XPG)


Gene families : OG0004929 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004929_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp2g18320.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00026p00019230 UVR1, UVH3,... DNA repair protein UVH3 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT3G28030 UVR1, UVH3 5'-3' exonuclease family protein 0.04 OrthoFinder output from all 47 species
Aev_g06180 UVR1, UVH3 DNA repair endonuclease *(XPG) & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g32867 UVR1, UVH3 DNA repair endonuclease *(XPG) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.23G005600.1 UVR1, UVH3,... DNA repair endonuclease *(XPG) & original description:... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020544.9 UVR1, UVH3 DNA repair protein UVH3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Cre10.g429050 UVR1, UVH3 DNA repair protein UVH3 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dac_g15099 UVR1, UVH3 DNA repair endonuclease *(XPG) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g15926 UVR1, UVH3 DNA repair endonuclease *(XPG) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01032508001 UVR1, UVH3 DNA repair protein UVH3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_23486 UVR1, UVH3 DNA repair endonuclease (XPG) 0.01 OrthoFinder output from all 47 species
LOC_Os03g10780.1 UVR1, UVH3,... DNA repair endonuclease (XPG) 0.03 OrthoFinder output from all 47 species
Ppi_g49406 UVR1, UVH3 DNA repair endonuclease *(XPG) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g25362 No alias DNA repair endonuclease *(XPG) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g067670.4.1 UVR1, UVH3,... DNA repair endonuclease (XPG) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006366 transcription by RNA polymerase II IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR006086 XPG-I_dom 1061 1144
IPR006085 XPG_DNA_repair_N 1 97
No external refs found!