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Description : component ACINUS of RNA quality control Exon Junction complex
Gene families : OG0001433 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001433_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT4G39680 | No alias | SAP domain-containing protein | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g051888 | No alias | component *(ACINUS) of RNA quality control Exon Junction... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g059772 | No alias | component *(ACINUS) of RNA quality control Exon Junction... | 0.01 | OrthoFinder output from all 47 species | |
| Adi_g087326 | No alias | component *(ACINUS) of RNA quality control Exon Junction... | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g07965 | No alias | component *(ACINUS) of RNA quality control Exon Junction... | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g02544 | No alias | component *(ACINUS) of RNA quality control Exon Junction... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g16232 | No alias | component *(ACINUS) of RNA quality control Exon Junction... | 0.05 | OrthoFinder output from all 47 species | |
| Als_g12459 | No alias | component *(ACINUS) of RNA quality control Exon Junction... | 0.05 | OrthoFinder output from all 47 species | |
| Als_g27768 | No alias | component *(ACINUS) of RNA quality control Exon Junction... | 0.06 | OrthoFinder output from all 47 species | |
| Als_g39202 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g07390 | No alias | component *(ACINUS) of RNA quality control Exon Junction... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g14212 | No alias | component *(ACINUS) of RNA quality control Exon Junction... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g68608 | No alias | component *(ACINUS) of RNA quality control Exon Junction... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0007.g010562 | No alias | component *(ACINUS) of RNA quality control Exon Junction... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g39106 | No alias | component *(ACINUS) of RNA quality control Exon Junction... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g39107 | No alias | component *(ACINUS) of RNA quality control Exon Junction... | 0.01 | OrthoFinder output from all 47 species | |
| Ceric.13G077200.1 | Ceric.13G077200 | component *(ACINUS) of RNA quality control Exon Junction... | 0.02 | OrthoFinder output from all 47 species | |
| Cre03.g204950 | No alias | No description available | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g11157 | No alias | component *(ACINUS) of RNA quality control Exon Junction... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g09840 | No alias | component *(ACINUS) of RNA quality control Exon Junction... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g39092 | No alias | component *(ACINUS) of RNA quality control Exon Junction... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g42746 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g23233 | No alias | component *(ACINUS) of RNA quality control Exon Junction... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g12307 | No alias | component *(ACINUS) of RNA quality control Exon Junction... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g19978 | No alias | component *(ACINUS) of RNA quality control Exon Junction... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01008977001 | No alias | RNA processing.RNA quality control Exon Junction complex... | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01022190001 | No alias | RNA processing.RNA quality control Exon Junction complex... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_05925 | No alias | component ACINUS of RNA quality control Exon Junction complex | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os03g26630.1 | LOC_Os03g26630 | component ACINUS of RNA quality control Exon Junction complex | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os07g43316.2 | LOC_Os07g43316 | component ACINUS of RNA quality control Exon Junction complex | 0.02 | OrthoFinder output from all 47 species | |
| Len_g24712 | No alias | component *(ACINUS) of RNA quality control Exon Junction... | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g34375 | No alias | component *(ACINUS) of RNA quality control Exon Junction... | 0.04 | OrthoFinder output from all 47 species | |
| MA_7197g0010 | No alias | component ACINUS of RNA quality control Exon Junction complex | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g44218 | No alias | component *(ACINUS) of RNA quality control Exon Junction... | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g04495 | No alias | component *(ACINUS) of RNA quality control Exon Junction... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g57721 | No alias | component *(ACINUS) of RNA quality control Exon Junction... | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g07237 | No alias | component *(ACINUS) of RNA quality control Exon Junction... | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g08232 | No alias | component *(ACINUS) of RNA quality control Exon Junction... | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g42834 | No alias | component *(ACINUS) of RNA quality control Exon Junction... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g10871 | No alias | component *(ACINUS) of RNA quality control Exon Junction... | 0.02 | OrthoFinder output from all 47 species | |
| Smo442865 | No alias | RNA processing.RNA quality control Exon Junction complex... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc04g072670.4.1 | Solyc04g072670 | component ACINUS of RNA quality control Exon Junction complex | 0.06 | OrthoFinder output from all 47 species | |
| Spa_g08782 | No alias | component *(ACINUS) of RNA quality control Exon Junction... | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g05227 | No alias | component *(ACINUS) of RNA quality control Exon Junction... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e001848_P001 | Zm00001e001848 | component ACINUS of RNA quality control Exon Junction complex | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e037964_P002 | Zm00001e037964 | component ACINUS of RNA quality control Exon Junction complex | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003682 | chromatin binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003729 | mRNA binding | IEP | HCCA |
| MF | GO:0004386 | helicase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005685 | U1 snRNP | IEP | HCCA |
| CC | GO:0005694 | chromosome | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006376 | mRNA splice site selection | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0016043 | cellular component organization | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| BP | GO:0016579 | protein deubiquitination | IEP | HCCA |
| BP | GO:0022607 | cellular component assembly | IEP | HCCA |
| BP | GO:0022618 | ribonucleoprotein complex assembly | IEP | HCCA |
| CC | GO:0030532 | small nuclear ribonucleoprotein complex | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0051276 | chromosome organization | IEP | HCCA |
| BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
| BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
| BP | GO:0071826 | ribonucleoprotein complex subunit organization | IEP | HCCA |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| CC | GO:0097525 | spliceosomal snRNP complex | IEP | HCCA |
| CC | GO:0120114 | Sm-like protein family complex | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
| No external refs found! |