- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : CPSRP43, CAO
Description : component cpSRP43 of thylakoid membrane SRP insertion system
Gene families : OG0007162 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007162_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Mp2g09760.1 | |
| Cluster | HCCA: Cluster_66 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00001p00270240 | CPSRP43, CAO,... | Protein translocation.chloroplast.thylakoid membrane SRP... | 0.02 | OrthoFinder output from all 47 species | |
| AT2G47450 | CPSRP43, CAO | chloroplast signal recognition particle component (CAO) | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g05408 | CPSRP43, CAO | component *(cpSRP43) of thylakoid membrane SRP insertion... | 0.01 | OrthoFinder output from all 47 species | |
| Als_g00847 | CPSRP43, CAO | component *(cpSRP43) of thylakoid membrane SRP insertion... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g04368 | CPSRP43, CAO | component *(cpSRP43) of thylakoid membrane SRP insertion... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.38G054000.1 | CPSRP43, CAO,... | component *(cpSRP43) of thylakoid membrane SRP insertion... | 0.06 | OrthoFinder output from all 47 species | |
| Cre04.g231026 | CPSRP43, CAO | Protein translocation.chloroplast.thylakoid membrane SRP... | 0.09 | OrthoFinder output from all 47 species | |
| Dcu_g39238 | CPSRP43, CAO | component *(cpSRP43) of thylakoid membrane SRP insertion... | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g17031 | CPSRP43, CAO | component *(cpSRP43) of thylakoid membrane SRP insertion... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_07319 | CPSRP43, CAO | component cpSRP43 of thylakoid membrane SRP insertion system | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g03990.1 | CPSRP43, CAO,... | component cpSRP43 of thylakoid membrane SRP insertion system | 0.04 | OrthoFinder output from all 47 species | |
| Len_g16711 | CPSRP43, CAO | component *(cpSRP43) of thylakoid membrane SRP insertion... | 0.03 | OrthoFinder output from all 47 species | |
| MA_845170g0010 | No alias | component cpSRP43 of thylakoid membrane SRP insertion system | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g12207 | CPSRP43, CAO | component *(cpSRP43) of thylakoid membrane SRP insertion... | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g21609 | CPSRP43, CAO | component *(cpSRP43) of thylakoid membrane SRP insertion... | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g41563 | CPSRP43, CAO | component *(cpSRP43) of thylakoid membrane SRP insertion... | 0.06 | OrthoFinder output from all 47 species | |
| Pir_g17134 | CPSRP43, CAO | component *(cpSRP43) of thylakoid membrane SRP insertion... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g03789 | CPSRP43, CAO | component *(cpSRP43) of thylakoid membrane SRP insertion... | 0.01 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0001.g000104 | CPSRP43, CAO | component *(cpSRP43) of thylakoid membrane SRP insertion... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g15650 | No alias | component *(cpSRP43) of thylakoid membrane SRP insertion... | 0.02 | OrthoFinder output from all 47 species | |
| Smo270723 | CPSRP43, CAO | Protein translocation.chloroplast.thylakoid membrane SRP... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc02g087400.1.1 | CPSRP43, CAO,... | component cpSRP43 of thylakoid membrane SRP insertion system | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g13003 | CPSRP43, CAO | component *(cpSRP43) of thylakoid membrane SRP insertion... | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g03919 | CPSRP43, CAO | component *(cpSRP43) of thylakoid membrane SRP insertion... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000049 | tRNA binding | IEP | HCCA |
| MF | GO:0003712 | transcription coregulator activity | IEP | HCCA |
| MF | GO:0003714 | transcription corepressor activity | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| BP | GO:0006720 | isoprenoid metabolic process | IEP | HCCA |
| BP | GO:0008299 | isoprenoid biosynthetic process | IEP | HCCA |
| CC | GO:0009507 | chloroplast | IEP | HCCA |
| CC | GO:0009536 | plastid | IEP | HCCA |
| No external refs found! |