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  5. Mp2g08990.1

Mp2g08990.1 (emb1427)


Aliases : emb1427

Description : component GCP5 of gamma-Tubulin ring complex (gamma-TuRC)


Gene families : OG0005639 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005639_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp2g08990.1
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
Ala_g21435 emb1427 component *(GCP5) of gamma-Tubulin ring complex &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene12259.t1 Aspi01Gene12259 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g08374 emb1427 component *(GCP5) of gamma-Tubulin ring complex &... 0.02 OrthoFinder output from all 47 species
GSVIVT01009573001 emb1427 Cytoskeleton.microtubular network.microtubule Tubulin... 0.02 OrthoFinder output from all 47 species
Gb_02392 No alias component GCP5 of gamma-Tubulin ring complex (gamma-TuRC) 0.02 OrthoFinder output from all 47 species
LOC_Os02g32340.1 emb1427, LOC_Os02g32340 component GCP5 of gamma-Tubulin ring complex (gamma-TuRC) 0.03 OrthoFinder output from all 47 species
Lfl_g17613 emb1427 component *(GCP5) of gamma-Tubulin ring complex &... 0.02 OrthoFinder output from all 47 species
Sam_g18670 No alias component *(GCP5) of gamma-Tubulin ring complex &... 0.02 OrthoFinder output from all 47 species
Tin_g20477 emb1427 component *(GCP5) of gamma-Tubulin ring complex &... 0.02 OrthoFinder output from all 47 species
Zm00001e035531_P001 emb1427, Zm00001e035531 component GCP5 of gamma-Tubulin ring complex (gamma-TuRC) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0043015 gamma-tubulin binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006904 vesicle docking involved in exocytosis IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
BP GO:0022406 membrane docking IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
BP GO:0048278 vesicle docking IEP HCCA
BP GO:0051640 organelle localization IEP HCCA
BP GO:0140029 exocytic process IEP HCCA
BP GO:0140056 organelle localization by membrane tethering IEP HCCA
InterPro domains Description Start Stop
IPR041470 GCP_N 56 299
IPR040457 GCP_C 789 1104
No external refs found!