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  5. Mp2g08400.1

Mp2g08400.1


Description : Protein RETICULATA-RELATED 4, chloroplastic OS=Arabidopsis thaliana (sp|q94cj5|rer4_arath : 409.0)


Gene families : OG0001331 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001331_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp2g08400.1

Target Alias Description ECC score Gene Family Method Actions
AT2G40400 No alias Protein of unknown function (DUF399 and DUF3411) 0.04 OrthoFinder output from all 47 species
AT5G12470 No alias Protein of unknown function (DUF3411) 0.05 OrthoFinder output from all 47 species
Als_g15861 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g09832 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0055.g033944 No alias not classified & original description: CDS=18-2474 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000863.14 No alias Protein RETICULATA-RELATED 4, chloroplastic... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001086.2 No alias No description available 0.01 OrthoFinder output from all 47 species
Cre03.g177350 No alias Protein RETICULATA-RELATED 4, chloroplastic... 0.01 OrthoFinder output from all 47 species
LOC_Os01g61120.1 LOC_Os01g61120 Protein RETICULATA-RELATED 6, chloroplastic... 0.02 OrthoFinder output from all 47 species
LOC_Os05g32230.1 LOC_Os05g32230 Protein RETICULATA-RELATED 4, chloroplastic... 0.02 OrthoFinder output from all 47 species
Solyc11g065490.2.1 Solyc11g065490 Protein RETICULATA-RELATED 4, chloroplastic... 0.02 OrthoFinder output from all 47 species
Spa_g22578 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g52655 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e018574_P001 Zm00001e018574 Protein RETICULATA-RELATED 4, chloroplastic... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006536 glutamate metabolic process IEP HCCA
BP GO:0006537 glutamate biosynthetic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
MF GO:0015930 glutamate synthase activity IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043648 dicarboxylic acid metabolic process IEP HCCA
BP GO:0043650 dicarboxylic acid biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR021825 RETICULATA-related 192 369
No external refs found!