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Description : component PRIN2 of plastid-encoded RNA polymerase
Gene families : OG0008326 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008326_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Mp2g05600.1 | |
| Cluster | HCCA: Cluster_66 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G10522 | No alias | unknown protein; FUNCTIONS IN: molecular_function... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g09148 | No alias | regulatory factor *(PRIN2) of plastid-encoded RNA... | 0.04 | OrthoFinder output from all 47 species | |
| Als_g05250 | No alias | regulatory factor *(PRIN2) of plastid-encoded RNA... | 0.05 | OrthoFinder output from all 47 species | |
| Aob_g09227 | No alias | regulatory factor *(PRIN2) of plastid-encoded RNA... | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene00656.t1 | Aspi01Gene00656 | regulatory factor *(PRIN2) of plastid-encoded RNA... | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0008.g011513 | No alias | not classified & original description: CDS=125-652 | 0.15 | OrthoFinder output from all 47 species | |
| Ceric.16G036000.1 | Ceric.16G036000 | regulatory factor *(PRIN2) of plastid-encoded RNA... | 0.05 | OrthoFinder output from all 47 species | |
| Dac_g03515 | No alias | regulatory factor *(PRIN2) of plastid-encoded RNA... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g24784 | No alias | regulatory factor *(PRIN2) of plastid-encoded RNA... | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g14880 | No alias | regulatory factor *(PRIN2) of plastid-encoded RNA... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01020166001 | No alias | RNA biosynthesis.organelle machineries.RNA polymerase... | 0.08 | OrthoFinder output from all 47 species | |
| GSVIVT01020172001 | No alias | RNA biosynthesis.organelle machineries.RNA polymerase... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os09g21460.1 | LOC_Os09g21460 | component PRIN2 of plastid-encoded RNA polymerase | 0.08 | OrthoFinder output from all 47 species | |
| Len_g02641 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g22031 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| MA_370678g0010 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g38061 | No alias | regulatory factor *(PRIN2) of plastid-encoded RNA... | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g11027 | No alias | regulatory factor *(PRIN2) of plastid-encoded RNA... | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g09394 | No alias | regulatory factor *(PRIN2) of plastid-encoded RNA... | 0.12 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0038.g012000 | No alias | not classified & original description: CDS=272-829 | 0.1 | OrthoFinder output from all 47 species | |
| Sam_g35106 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Solyc05g006110.3.1 | Solyc05g006110 | component PRIN2 of plastid-encoded RNA polymerase | 0.13 | OrthoFinder output from all 47 species | |
| Spa_g39036 | No alias | regulatory factor *(PRIN2) of plastid-encoded RNA... | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g51702 | No alias | regulatory factor *(PRIN2) of plastid-encoded RNA... | 0.1 | OrthoFinder output from all 47 species | |
| Tin_g01550 | No alias | regulatory factor *(PRIN2) of plastid-encoded RNA... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003746 | translation elongation factor activity | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005737 | cytoplasm | IEP | HCCA |
| BP | GO:0006414 | translational elongation | IEP | HCCA |
| BP | GO:0006457 | protein folding | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| MF | GO:0045182 | translation regulator activity | IEP | HCCA |
| MF | GO:0050661 | NADP binding | IEP | HCCA |
| MF | GO:0051287 | NAD binding | IEP | HCCA |
| MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |