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  5. Mp2g03740.1

Mp2g03740.1


Description : stromal sorting factor of thylakoid membrane SRP insertion system (STIC2)


Gene families : OG0004403 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004403_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp2g03740.1
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
AT2G24020 No alias Uncharacterised BCR, YbaB family COG0718 0.12 OrthoFinder output from all 47 species
AT4G30620 No alias Uncharacterised BCR, YbaB family COG0718 0.03 OrthoFinder output from all 47 species
Adi_g012529 No alias stromal sorting factor of thylakoid membrane SRP... 0.03 OrthoFinder output from all 47 species
Aev_g04539 No alias stromal sorting factor of thylakoid membrane SRP... 0.06 OrthoFinder output from all 47 species
Ala_g00370 No alias stromal sorting factor of thylakoid membrane SRP... 0.04 OrthoFinder output from all 47 species
Als_g23352 No alias stromal sorting factor of thylakoid membrane SRP... 0.07 OrthoFinder output from all 47 species
Aop_g70924 No alias stromal sorting factor of thylakoid membrane SRP... 0.02 OrthoFinder output from all 47 species
Aspi01Gene29776.t1 Aspi01Gene29776 stromal sorting factor of thylakoid membrane SRP... 0.02 OrthoFinder output from all 47 species
Cba_g29659 No alias stromal sorting factor of thylakoid membrane SRP... 0.02 OrthoFinder output from all 47 species
Ceric.29G037500.1 Ceric.29G037500 stromal sorting factor of thylakoid membrane SRP... 0.04 OrthoFinder output from all 47 species
Ceric.35G009300.1 Ceric.35G009300 stromal sorting factor of thylakoid membrane SRP... 0.06 OrthoFinder output from all 47 species
Cre10.g458550 No alias Protein translocation.chloroplast.thylakoid membrane SRP... 0.04 OrthoFinder output from all 47 species
Dac_g01938 No alias stromal sorting factor of thylakoid membrane SRP... 0.04 OrthoFinder output from all 47 species
Dcu_g21326 No alias stromal sorting factor of thylakoid membrane SRP... 0.03 OrthoFinder output from all 47 species
Dcu_g37307 No alias stromal sorting factor of thylakoid membrane SRP... 0.03 OrthoFinder output from all 47 species
Dde_g03647 No alias stromal sorting factor of thylakoid membrane SRP... 0.02 OrthoFinder output from all 47 species
Ehy_g10854 No alias stromal sorting factor of thylakoid membrane SRP... 0.11 OrthoFinder output from all 47 species
GSVIVT01023623001 No alias Protein translocation.chloroplast.thylakoid membrane SRP... 0.05 OrthoFinder output from all 47 species
Gb_22716 No alias stromal sorting factor of thylakoid membrane SRP... 0.19 OrthoFinder output from all 47 species
LOC_Os02g08380.1 LOC_Os02g08380 stromal sorting factor of thylakoid membrane SRP... 0.07 OrthoFinder output from all 47 species
Len_g22373 No alias stromal sorting factor of thylakoid membrane SRP... 0.02 OrthoFinder output from all 47 species
Lfl_g00568 No alias stromal sorting factor of thylakoid membrane SRP... 0.1 OrthoFinder output from all 47 species
Lfl_g33165 No alias stromal sorting factor of thylakoid membrane SRP... 0.02 OrthoFinder output from all 47 species
MA_165748g0020 No alias stromal sorting factor of thylakoid membrane SRP... 0.02 OrthoFinder output from all 47 species
Msp_g07231 No alias stromal sorting factor of thylakoid membrane SRP... 0.07 OrthoFinder output from all 47 species
Nbi_g00106 No alias stromal sorting factor of thylakoid membrane SRP... 0.02 OrthoFinder output from all 47 species
Nbi_g08626 No alias stromal sorting factor of thylakoid membrane SRP... 0.04 OrthoFinder output from all 47 species
Pir_g17206 No alias stromal sorting factor of thylakoid membrane SRP... 0.02 OrthoFinder output from all 47 species
Ppi_g00503 No alias stromal sorting factor of thylakoid membrane SRP... 0.03 OrthoFinder output from all 47 species
Ppi_g04839 No alias stromal sorting factor of thylakoid membrane SRP... 0.02 OrthoFinder output from all 47 species
Sam_g37120 No alias stromal sorting factor of thylakoid membrane SRP... 0.03 OrthoFinder output from all 47 species
Solyc12g009980.2.1 Solyc12g009980 stromal sorting factor of thylakoid membrane SRP... 0.15 OrthoFinder output from all 47 species
Spa_g06795 No alias stromal sorting factor of thylakoid membrane SRP... 0.13 OrthoFinder output from all 47 species
Spa_g40192 No alias stromal sorting factor of thylakoid membrane SRP... 0.03 OrthoFinder output from all 47 species
Tin_g05353 No alias stromal sorTing factor of thylakoid membrane SRP... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006457 protein folding IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR004401 YbaB/EbfC 85 171
No external refs found!