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Aliases : LSH4
Description : Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3 OS=Arabidopsis thaliana (sp|o82268|lsh3_arath : 182.0)
Gene families : OG0001118 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001118_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00153p00047660 | evm_27.TU.AmTr_v1... | Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00155p00022580 | LSH6,... | Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3... | 0.02 | OrthoFinder output from all 47 species | |
| AT1G78815 | LSH7 | Protein of unknown function (DUF640) | 0.06 | OrthoFinder output from all 47 species | |
| AT2G42610 | LSH10 | Protein of unknown function (DUF640) | 0.02 | OrthoFinder output from all 47 species | |
| AT3G04510 | LSH2 | Protein of unknown function (DUF640) | 0.02 | OrthoFinder output from all 47 species | |
| AT5G28490 | LSH1 | Protein of unknown function (DUF640) | 0.02 | OrthoFinder output from all 47 species | |
| AT5G58500 | LSH5 | Protein of unknown function (DUF640) | 0.01 | OrthoFinder output from all 47 species | |
| Adi_g018931 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.01 | OrthoFinder output from all 47 species | |
| Ala_g06922 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.01 | OrthoFinder output from all 47 species | |
| Als_g04816 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Als_g17249 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Als_g27588 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.01 | OrthoFinder output from all 47 species | |
| Aop_g03451 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene25077.t1 | LSH4, Aspi01Gene25077 | plant-specific ALOG-type transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene27756.t1 | LSH4, Aspi01Gene27756 | plant-specific ALOG-type transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene66763.t1 | LSH4, Aspi01Gene66763 | plant-specific ALOG-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s3307.g115288 | LSH6 | plant-specific ALOG-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.14G090800.1 | LSH6, Ceric.14G090800 | plant-specific ALOG-type transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.18G075200.1 | LSH4, Ceric.18G075200 | plant-specific ALOG-type transcription factor & original... | 0.01 | OrthoFinder output from all 47 species | |
| Dcu_g05446 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g11211 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01020708001 | LSH10 | Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01021754001 | LSH4 | Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01024677001 | LSH6 | Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os05g28040.1 | LSH6, LOC_Os05g28040 | Protein G1-like9 OS=Oryza sativa subsp. indica... | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os05g39500.1 | LSH6, LOC_Os05g39500 | Protein G1-like8 OS=Oryza sativa subsp. japonica... | 0.07 | OrthoFinder output from all 47 species | |
| Len_g03807 | LSH1 | plant-specific ALOG-type transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g25188 | LSH6 | plant-specific ALOG-type transcription factor & original... | 0.01 | OrthoFinder output from all 47 species | |
| Nbi_g02008 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g04394 | LSH6 | plant-specific ALOG-type transcription factor & original... | 0.01 | OrthoFinder output from all 47 species | |
| Nbi_g26624 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g10661 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g32132 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc04g009980.4.1 | LSH1, Solyc04g009980 | Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc06g082210.1.1 | LSH6, Solyc06g082210 | Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc10g008000.1.1 | LSH10, Solyc10g008000 | Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10... | 0.01 | OrthoFinder output from all 47 species | |
| Spa_g28138 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g06794 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.01 | OrthoFinder output from all 47 species | |
| Tin_g09211 | LSH6 | plant-specific ALOG-type transcription factor & original... | 0.01 | OrthoFinder output from all 47 species | |
| Zm00001e019403_P001 | LSH6, Zm00001e019403 | Protein G1-like7 OS=Oryza sativa subsp. indica... | 0.01 | OrthoFinder output from all 47 species | |
| Zm00001e027222_P001 | LSH6, Zm00001e027222 | Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e028824_P001 | LSH6, Zm00001e028824 | Protein G1-like8 OS=Oryza sativa subsp. indica... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e031512_P001 | LSH6, Zm00001e031512 | Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR006936 | ALOG_dom | 45 | 168 |
| No external refs found! |