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  5. Mp1g29270.1

Mp1g29270.1


Description : MDC1-like homologous recombination repair factor


Gene families : OG0002706 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002706_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp1g29270.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00134990 evm_27.TU.AmTr_v1... DNA damage response.DNA repair mechanisms.homologous... 0.03 OrthoFinder output from all 47 species
Adi_g057113 No alias homologous recombination repair factor *(MDC1) &... 0.02 OrthoFinder output from all 47 species
Adi_g088090 No alias homologous recombination repair factor *(MDC1) &... 0.02 OrthoFinder output from all 47 species
Aob_g14464 No alias homologous recombination repair factor *(MDC1) &... 0.02 OrthoFinder output from all 47 species
Aob_g31847 No alias homologous recombination repair factor *(MDC1) &... 0.04 OrthoFinder output from all 47 species
Ceric.13G072400.1 Ceric.13G072400 homologous recombination repair factor *(MDC1) &... 0.02 OrthoFinder output from all 47 species
Dac_g33438 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g20473 No alias homologous recombination repair factor *(MDC1) &... 0.06 OrthoFinder output from all 47 species
Dde_g19978 No alias homologous recombination repair factor *(MDC1) &... 0.02 OrthoFinder output from all 47 species
Msp_g15667 No alias homologous recombination repair factor *(MDC1) &... 0.03 OrthoFinder output from all 47 species
Pnu_g13867 No alias homologous recombination repair factor *(MDC1) &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
InterPro domains Description Start Stop
IPR001357 BRCT_dom 1580 1673
No external refs found!