LOC_Os04g32790 (Os04g0399800)


Aliases : Os04g0399800

Description : 27.3.3 RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family Encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (LEAFY PETIOLE). The protein ?//CONTAINS one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and LEAFY PETIOLE. Acts as a positive regulator of gibberellic acid-induced germination.


Gene families : OG_01_0000000 (Gene family) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os04g32790
Cluster HCCA cluster: Cluster_137

Target Alias Description ECC score Gene Family Method Actions
AT3G61630 CRF6 cytokinin response factor 6 0.07 Gene family
GSVIVT01013903001 No alias No description available 0.06 Gene family
GSVIVT01021060001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os01g21120 Os01g0313300 No description available 0.01 Gene family
LOC_Os01g64790 Os01g0868000 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
LOC_Os02g51670 Os02g0752800 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.05 Gene family
LOC_Os05g39590 Os05g0473300 No description available 0.01 Gene family
MA_10434101g0020 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.01 Gene family
MA_135279g0010 No alias No description available 0.05 Gene family
MA_329325g0010 No alias No description available 0.01 Gene family
MA_55226g0020 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.01 Gene family
MA_7960347g0010 No alias No description available 0.01 Gene family
MA_8384767g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
MA_912855g0010 No alias No description available 0.01 Gene family
MA_938274g0010 No alias No description available 0.01 Gene family
Solyc02g077360.1.1 Solyc02g077360.1 No description available 0.01 Gene family
Solyc06g082590.1.1 Solyc06g082590.1 No description available 0.02 Gene family
Solyc08g078170.1.1 Solyc08g078170.1 No description available 0.02 Gene family
Solyc08g078180.1.1 Solyc08g078180.1 No description available 0.02 Gene family
Solyc09g089930.2.1 Solyc09g089930.2 No description available 0.01 Gene family
Zm00001d000179 GRMZM5G889719 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.01 Gene family
Zm00001d002760 GRMZM2G475678 No description available 0.01 Gene family
Zm00001d002761 GRMZM5G805505 No description available 0.01 Gene family
Zm00001d005892 GRMZM2G138396 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
Zm00001d009573 GRMZM2G021790 No description available 0.33 Gene family
Zm00001d017477 GRMZM5G842961 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d031673 GRMZM2G309731 No description available 0.01 Gene family
Zm00001d031796 GRMZM2G369472 17.5.2 hormone metabolism.ethylene.signal transduction... 0.01 Gene family
Zm00001d038320 GRMZM2G100727 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.01 Gene family
Zm00001d044857 GRMZM5G852704 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.08 Gene family
Zm00001d045204 GRMZM2G301860 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.01 Gene family
Zm00001d052229 GRMZM2G029323 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d053859 GRMZM2G052720 No description available 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 51 100
No external refs found!