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  5. Mp1g28900.1

Mp1g28900.1


Description : AP-endonuclease (APE2)


Gene families : OG0002359 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002359_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp1g28900.1
Cluster HCCA: Cluster_64

Target Alias Description ECC score Gene Family Method Actions
Aev_g20679 No alias AP-endonuclease *(APE2) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g07050 No alias EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01018776001 No alias DNA damage response.DNA repair mechanisms.base excision... 0.02 OrthoFinder output from all 47 species
Smo405855 No alias DNA damage response.DNA repair mechanisms.base excision... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003747 translation release factor activity IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005759 mitochondrial matrix IEP HCCA
BP GO:0006415 translational termination IEP HCCA
MF GO:0008079 translation termination factor activity IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
CC GO:0031974 membrane-enclosed lumen IEP HCCA
BP GO:0032984 protein-containing complex disassembly IEP HCCA
CC GO:0043233 organelle lumen IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
CC GO:0070013 intracellular organelle lumen IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR010666 Znf_GRF 593 641
IPR005135 Endo/exonuclease/phosphatase 15 287
No external refs found!