LOC_Os04g32620 (Os04g0398000)


Aliases : Os04g0398000

Description : 27.3.3 RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family encodes a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family. The protein ?//CONTAINS one AP2 domain. There are 7 members in this subfamily.


Gene families : OG_01_0000000 (Gene family) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os04g32620
Cluster HCCA cluster: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
AT1G04370 ERF14, ATERF14 Ethylene-responsive element binding factor 14 0.02 Gene family
AT1G06160 ORA59 octadecanoid-responsive Arabidopsis AP2/ERF 59 0.05 Gene family
AT1G15360 WIN1, SHN1 Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT1G43160 RAP2.6 related to AP2 6 0.03 Gene family
AT1G71520 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT1G75490 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT2G25820 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT2G40220 ABI4, SAN5,... Integrase-type DNA-binding superfamily protein 0.04 Gene family
AT2G47520 HRE2 Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT3G15210 ATERF4, RAP2.5,... ethylene responsive element binding factor 4 0.02 Gene family
AT3G23230 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT3G57600 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT4G11140 CRF1 cytokinin response factor 1 0.03 Gene family
AT4G17490 ERF-6-6, ERF6, ATERF6 ethylene responsive element binding factor 6 0.03 Gene family
AT4G17500 ERF-1, ATERF-1 ethylene responsive element binding factor 1 0.04 Gene family
AT5G07310 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT5G07580 No alias Integrase-type DNA-binding superfamily protein 0.01 Gene family
AT5G13910 LEP Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT5G25810 tny Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT5G43410 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT5G44210 ATERF-9, ERF9, ATERF9 erf domain protein 9 0.02 Gene family
AT5G50080 ERF110 ethylene response factor 110 0.02 Gene family
AT5G61890 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT5G64750 ABR1 Integrase-type DNA-binding superfamily protein 0.03 Gene family
GSVIVT01001089001 No alias No description available 0.03 Gene family
GSVIVT01008649001 No alias No description available 0.03 Gene family
GSVIVT01013903001 No alias No description available 0.03 Gene family
GSVIVT01018272001 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.04 Gene family
GSVIVT01032983001 No alias No description available 0.02 Gene family
GSVIVT01034563001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.06 Gene family
GSVIVT01036201001 No alias No description available 0.03 Gene family
GSVIVT01036228001 No alias No description available 0.02 Gene family
LOC_Os01g21120 Os01g0313300 No description available 0.04 Gene family
LOC_Os01g54890 Os01g0752500 No description available 0.03 Gene family
LOC_Os02g06330 No alias No description available 0.02 Gene family
LOC_Os02g52670 Os02g0764700 No description available 0.02 Gene family
LOC_Os03g08470 Os03g0183000 No description available 0.03 Gene family
LOC_Os04g46400 Os04g0549700 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
LOC_Os05g29810 Os05g0361700 No description available 0.04 Gene family
LOC_Os05g39590 Os05g0473300 No description available 0.03 Gene family
LOC_Os05g41760 Os05g0497200 No description available 0.02 Gene family
LOC_Os08g31580 Os08g0408500 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.01 Gene family
LOC_Os08g35240 Os08g0454000 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os09g11480 Os09g0287000 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
LOC_Os09g13940 Os09g0309700 No description available 0.02 Gene family
LOC_Os09g28440 Os09g0457900 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
LOC_Os09g39850 Os09g0572000 No description available 0.03 Gene family
LOC_Os10g41330 Os10g0562900 No description available 0.02 Gene family
LOC_Os12g39330 Os12g0582900 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
MA_10031781g0010 No alias No description available 0.04 Gene family
MA_10430769g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
MA_10431529g0010 No alias No description available 0.02 Gene family
MA_10433094g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
MA_116185g0010 No alias No description available 0.01 Gene family
MA_162045g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_168025g0010 No alias No description available 0.04 Gene family
MA_179692g0020 No alias No description available 0.03 Gene family
MA_19420g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_27309g0010 No alias No description available 0.03 Gene family
MA_329325g0010 No alias No description available 0.05 Gene family
MA_3405g0010 No alias No description available 0.01 Gene family
MA_4182g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_42369g0010 No alias No description available 0.03 Gene family
MA_54341g0010 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
MA_55226g0020 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
MA_7960347g0010 No alias No description available 0.02 Gene family
MA_8384767g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
MA_912855g0010 No alias No description available 0.04 Gene family
MA_938274g0010 No alias No description available 0.04 Gene family
MA_96512g0020 No alias No description available 0.02 Gene family
Smo409196 PACid_15422590 No description available 0.03 Gene family
Smo73155 PACid_15404551 No description available 0.03 Gene family
Solyc01g090370.2.1 Solyc01g090370.2 No description available 0.03 Gene family
Solyc02g077360.1.1 Solyc02g077360.1 No description available 0.04 Gene family
Solyc02g077370.1.1 Solyc02g077370.1 No description available 0.03 Gene family
Solyc03g005500.1.1 Solyc03g005500.1 No description available 0.03 Gene family
Solyc03g005510.2.1 Solyc03g005510.2 No description available 0.02 Gene family
Solyc03g005520.1.1 Solyc03g005520.1 No description available 0.03 Gene family
Solyc03g118190.3.1 Solyc03g118190.3 No description available 0.02 Gene family
Solyc04g071770.3.1 Solyc04g071770.3 No description available 0.05 Gene family
Solyc04g072300.1.1 Solyc04g072300.1 No description available 0.02 Gene family
Solyc05g052030.1.1 Solyc05g052030.1 No description available 0.02 Gene family
Solyc05g052410.2.1 Solyc05g052410.2 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Solyc06g063070.3.1 Solyc06g063070.3 No description available 0.05 Gene family
Solyc06g066540.1.1 Solyc06g066540.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
Solyc08g078170.1.1 Solyc08g078170.1 No description available 0.03 Gene family
Solyc09g089930.2.1 Solyc09g089930.2 No description available 0.03 Gene family
Solyc10g009110.1.1 Solyc10g009110.1 No description available 0.02 Gene family
Solyc10g076380.2.1 Solyc10g076380.2 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Solyc12g013660.2.1 Solyc12g013660.2 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Solyc12g042210.2.1 Solyc12g042210.2 No description available 0.02 Gene family
Zm00001d000179 GRMZM5G889719 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d002762 GRMZM2G055180 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
Zm00001d009103 GRMZM2G053503 No description available 0.02 Gene family
Zm00001d014113 GRMZM2G024871 17.5.3 hormone... 0.03 Gene family
Zm00001d016616 GRMZM2G016434 No description available 0.03 Gene family
Zm00001d016623 GRMZM2G047999 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d019734 GRMZM2G123119 No description available 0.04 Gene family
Zm00001d019744 GRMZM2G060517 No description available 0.02 Gene family
Zm00001d020595 GRMZM2G052667 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
Zm00001d023535 GRMZM2G544539 No description available 0.03 Gene family
Zm00001d026191 GRMZM2G080516 No description available 0.02 Gene family
Zm00001d026271 GRMZM2G438202 No description available 0.02 Gene family
Zm00001d026447 GRMZM2G421033 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d027686 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
Zm00001d029679 GRMZM2G477287 No description available 0.03 Gene family
Zm00001d031796 GRMZM2G369472 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
Zm00001d034920 GRMZM2G381441 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
Zm00001d040651 GRMZM2G169382 No description available 0.02 Gene family
Zm00001d042717 GRMZM2G149756 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d043491 GRMZM2G474326 No description available 0.06 Gene family
Zm00001d046292 GRMZM2G073047 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.01 Gene family
Zm00001d049058 GRMZM2G073258,... No description available 0.03 Gene family
Zm00001d052026 GRMZM2G111415 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d052167 GRMZM2G173771 No description available 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 66 115
No external refs found!