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  5. Mp1g27450.1

Mp1g27450.1


Description : component CAP-H of condensin I complex


Gene families : OG0005098 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005098_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp1g27450.1
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00106p00055930 evm_27.TU.AmTr_v1... Cell cycle.mitosis and meiosis.chromatin... 0.11 OrthoFinder output from all 47 species
AT2G32590 No alias LOCATED IN: chloroplast; EXPRESSED IN: 17 plant... 0.15 OrthoFinder output from all 47 species
Ala_g22424 No alias component *(CAP-H) of condensin I complex & original... 0.15 OrthoFinder output from all 47 species
Als_g40608 No alias component *(CAP-H) of condensin I complex & original... 0.02 OrthoFinder output from all 47 species
Als_g48614 No alias component *(CAP-H) of condensin I complex & original... 0.02 OrthoFinder output from all 47 species
Aop_g08545 No alias component *(CAP-H) of condensin I complex & original... 0.17 OrthoFinder output from all 47 species
Aspi01Gene20029.t1 Aspi01Gene20029 component *(CAP-H) of condensin I complex & original... 0.05 OrthoFinder output from all 47 species
Aspi01Gene24141.t1 Aspi01Gene24141 component *(CAP-H) of condensin I complex & original... 0.09 OrthoFinder output from all 47 species
Azfi_s0509.g074694 No alias component *(CAP-H) of condensin I complex & original... 0.08 OrthoFinder output from all 47 species
Ceric.07G099800.1 Ceric.07G099800 component *(CAP-H) of condensin I complex & original... 0.24 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021462.43 No alias Cell cycle.mitosis and meiosis.chromatin... 0.05 OrthoFinder output from all 47 species
Cre13.g589300 No alias Cell cycle.mitosis and meiosis.chromatin... 0.07 OrthoFinder output from all 47 species
Dac_g15657 No alias component *(CAP-H) of condensin I complex & original... 0.13 OrthoFinder output from all 47 species
Dcu_g36452 No alias component *(CAP-H) of condensin I complex & original... 0.18 OrthoFinder output from all 47 species
GSVIVT01030475001 No alias Cell cycle.mitosis and meiosis.chromatin... 0.14 OrthoFinder output from all 47 species
Gb_02904 No alias component CAP-H of condensin I complex 0.16 OrthoFinder output from all 47 species
LOC_Os01g34870.1 LOC_Os01g34870 component CAP-H of condensin I complex 0.13 OrthoFinder output from all 47 species
Len_g11591 No alias component *(CAP-H) of condensin I complex & original... 0.11 OrthoFinder output from all 47 species
Lfl_g18514 No alias component *(CAP-H) of condensin I complex & original... 0.03 OrthoFinder output from all 47 species
MA_10431431g0010 No alias component CAP-H of condensin I complex 0.13 OrthoFinder output from all 47 species
MA_58375g0020 No alias component CAP-H of condensin I complex 0.02 OrthoFinder output from all 47 species
MA_98643g0010 No alias component CAP-H of condensin I complex 0.03 OrthoFinder output from all 47 species
Msp_g14467 No alias component *(CAP-H) of condensin I complex & original... 0.15 OrthoFinder output from all 47 species
Nbi_g03738 No alias component *(CAP-H) of condensin I complex & original... 0.21 OrthoFinder output from all 47 species
Ore_g28177 No alias component *(CAP-H) of condensin I complex & original... 0.01 OrthoFinder output from all 47 species
Ppi_g03206 No alias component *(CAP-H) of condensin I complex & original... 0.12 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000557 No alias component *(CAP-H) of condensin I complex & original... 0.12 OrthoFinder output from all 47 species
Solyc07g049680.4.1 Solyc07g049680 component CAP-H of condensin I complex 0.1 OrthoFinder output from all 47 species
Spa_g12373 No alias component *(CAP-H) of condensin I complex & original... 0.18 OrthoFinder output from all 47 species
Spa_g51155 No alias component *(CAP-H) of condensin I complex & original... 0.17 OrthoFinder output from all 47 species
Tin_g04131 No alias component *(CAP-H) of condensin I complex & original... 0.19 OrthoFinder output from all 47 species
Zm00001e020787_P001 Zm00001e020787 component CAP-H of condensin I complex 0.15 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0000796 condensin complex IEA Interproscan
BP GO:0007076 mitotic chromosome condensation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000278 mitotic cell cycle IEP HCCA
CC GO:0000775 chromosome, centromeric region IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003896 DNA primase activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006269 DNA replication, synthesis of RNA primer IEP HCCA
BP GO:0006270 DNA replication initiation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0007049 cell cycle IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0010639 negative regulation of organelle organization IEP HCCA
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP HCCA
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032780 negative regulation of ATP-dependent activity IEP HCCA
BP GO:0033043 regulation of organelle organization IEP HCCA
BP GO:0033044 regulation of chromosome organization IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
CC GO:0042555 MCM complex IEP HCCA
BP GO:0043086 negative regulation of catalytic activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043462 regulation of ATP-dependent activity IEP HCCA
BP GO:0044092 negative regulation of molecular function IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0051095 regulation of helicase activity IEP HCCA
BP GO:0051097 negative regulation of helicase activity IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051129 negative regulation of cellular component organization IEP HCCA
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0071821 FANCM-MHF complex IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0098687 chromosomal region IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1905462 regulation of DNA duplex unwinding IEP HCCA
BP GO:1905463 negative regulation of DNA duplex unwinding IEP HCCA
BP GO:1905774 regulation of DNA helicase activity IEP HCCA
BP GO:1905775 negative regulation of DNA helicase activity IEP HCCA
BP GO:2001251 negative regulation of chromosome organization IEP HCCA
InterPro domains Description Start Stop
IPR022816 Condensin_barren_su2 46 608
IPR022816 Condensin_barren_su2 607 726
No external refs found!