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  5. Mp5g18210.1

Mp5g18210.1


Description : RAE1 scaffold nucleoporin of nuclear pore complex


Gene families : OG_01_0003816 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003816_tree ,
OG_02_0004359 (LandPlants) Phylogenetic Tree(s): OG_02_0004359_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp5g18210.1
Cluster HCCA: Cluster_165

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000215.115 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.02 Archaeplastida
Cre06.g278097 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.05 Archaeplastida
Gb_30896 No alias Protein RAE1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_27152g0010 No alias Protein RAE1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Pp3c18_21020V3.1 No alias Transducin/WD40 repeat-like superfamily protein 0.02 Archaeplastida
Solyc10g047000.2.1 No alias RAE1 scaffold nucleoporin of nuclear pore complex 0.05 Archaeplastida
AMTR_s00010p00233620 evm_27.TU.AmTr_v1... Protein translocation.nucleus.nucleocytoplasmic... 0.01 LandPlants
Gb_30896 No alias Protein RAE1 OS=Arabidopsis thaliana... 0.03 LandPlants
MA_27152g0010 No alias Protein RAE1 OS=Arabidopsis thaliana... 0.04 LandPlants
Pp3c18_21020V3.1 No alias Transducin/WD40 repeat-like superfamily protein 0.02 LandPlants
Solyc10g047000.2.1 No alias RAE1 scaffold nucleoporin of nuclear pore complex 0.05 LandPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001680 WD40_repeat 28 53
IPR001680 WD40_repeat 111 140
No external refs found!