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  5. Mp1g25630.1

Mp1g25630.1


Description : platform ATPase (CDC48)


Gene families : OG0000324 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000324_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp1g25630.1

Target Alias Description ECC score Gene Family Method Actions
Cba_g67891 CDC48A, CDC48, ATCDC48 platform ATPase CDC48 & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.02G031700.1 Ceric.02G031700 platform ATPase CDC48 & original description:... 0.02 OrthoFinder output from all 47 species
LOC_Os05g31220.1 CDC48B, LOC_Os05g31220 Cell division control protein 48 homolog B... 0.02 OrthoFinder output from all 47 species
Lfl_g16566 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10427366g0010 CDC48B Cell division control protein 48 homolog B... 0.02 OrthoFinder output from all 47 species
Smo89456 emb1354, CDC48C Cell division control protein 48 homolog C... 0.02 OrthoFinder output from all 47 species
Zm00001e012761_P001 Zm00001e012761 platform ATPase (CDC48) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 526 659
IPR003959 ATPase_AAA_core 253 382
IPR041569 AAA_lid_3 405 446
IPR041569 AAA_lid_3 682 723
IPR003338 CDC4_N-term_subdom 38 119
IPR004201 Cdc48_dom2 139 202
No external refs found!