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Description : no hits & (original description: none)
Gene families : OG0004428 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004428_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Mp1g25050.1 | |
| Cluster | HCCA: Cluster_41 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00007p00264760 | evm_27.TU.AmTr_v1... | No description available | 0.05 | OrthoFinder output from all 47 species | |
| AT2G34357 | No alias | ARM repeat superfamily protein | 0.19 | OrthoFinder output from all 47 species | |
| Aev_g05537 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g07501 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g15219 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g05321 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0008.g011517 | No alias | not classified & original description: CDS=97-4008 | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g11874 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.18G047800.1 | Ceric.18G047800 | not classified & original description: pacid=50622555... | 0.04 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00020554.42 | No alias | No description available | 0.09 | OrthoFinder output from all 47 species | |
| Cre19.g751197 | No alias | No description available | 0.12 | OrthoFinder output from all 47 species | |
| Dac_g17123 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g11589 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g08172 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Gb_09813 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Gb_23183 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g54110.1 | LOC_Os02g54110 | no hits & (original description: none) | 0.16 | OrthoFinder output from all 47 species | |
| Len_g20663 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g07438 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_10433024g0020 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| MA_242029g0010 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| MA_55053g0010 | No alias | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g16189 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g36824 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Pp3c2_3190V3.1 | Pp3c2_3190 | ARM repeat superfamily protein | 0.01 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0038.g012003 | No alias | not classified & original description: CDS=123-3902 | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g16187 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc07g042380.4.1 | Solyc07g042380 | no hits & (original description: none) | 0.09 | OrthoFinder output from all 47 species | |
| Zm00001e016059_P003 | Zm00001e016059 | no hits & (original description: none) | 0.14 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000154 | rRNA modification | IEP | HCCA |
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| BP | GO:0001510 | RNA methylation | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003678 | DNA helicase activity | IEP | HCCA |
| MF | GO:0004386 | helicase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| CC | GO:0005730 | nucleolus | IEP | HCCA |
| BP | GO:0006364 | rRNA processing | IEP | HCCA |
| MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
| MF | GO:0008134 | transcription factor binding | IEP | HCCA |
| MF | GO:0008168 | methyltransferase activity | IEP | HCCA |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | HCCA |
| MF | GO:0008649 | rRNA methyltransferase activity | IEP | HCCA |
| MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | HCCA |
| BP | GO:0009451 | RNA modification | IEP | HCCA |
| BP | GO:0016072 | rRNA metabolic process | IEP | HCCA |
| MF | GO:0016435 | rRNA (guanine) methyltransferase activity | IEP | HCCA |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| BP | GO:0031167 | rRNA methylation | IEP | HCCA |
| BP | GO:0032259 | methylation | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| BP | GO:0036265 | RNA (guanine-N7)-methylation | IEP | HCCA |
| BP | GO:0042254 | ribosome biogenesis | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043414 | macromolecule methylation | IEP | HCCA |
| BP | GO:0044085 | cellular component biogenesis | IEP | HCCA |
| BP | GO:0070475 | rRNA base methylation | IEP | HCCA |
| BP | GO:0070476 | rRNA (guanine-N7)-methylation | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:0140102 | catalytic activity, acting on a rRNA | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR012978 | RRP12-like_dom | 396 | 597 |
| No external refs found! |