Mp1g23710.1 (PRA1.B4)


Aliases : PRA1.B4

Description : B-G-class Rab-GDF protein


Gene families : OG0000542 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000542_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp1g23710.1
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
AT2G38360 PRA1.B4 prenylated RAB acceptor 1.B4 0.06 OrthoFinder output from all 47 species
Adi_g025045 PRA1.B5 B-G-class Rab-GDF protein & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g078334 PRA7, PRA1.F2 B-G-class Rab-GDF protein & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g086450 PRA1.B6 B-G-class Rab-GDF protein & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g00225 PRA1.B5 B-G-class Rab-GDF protein & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene11339.t1 PRA1.B5, Aspi01Gene11339 B-G-class Rab-GDF protein & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g10010.2 PRA1.F3, PRA8,... B-G-class Rab-GDF protein 0.06 OrthoFinder output from all 47 species
LOC_Os05g39670.1 PRA1.B2, LOC_Os05g39670 B-G-class Rab-GDF protein 0.03 OrthoFinder output from all 47 species
MA_10434854g0010 PRA1.B4 B-G-class Rab-GDF protein 0.03 OrthoFinder output from all 47 species
Ore_g10850 PRA1.B3 B-G-class Rab-GDF protein & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0077.g017592 PRA1.B3 B-G-class Rab-GDF protein & original description: CDS=1-558 0.02 OrthoFinder output from all 47 species
Sam_g08491 No alias B-G-class Rab-GDF protein & original description: none 0.02 OrthoFinder output from all 47 species
Solyc09g083320.1.1 PRA1.E, Solyc09g083320 B-G-class Rab-GDF protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR004895 Prenylated_rab_accept_PRA1 40 179
No external refs found!