Mp5g17910.1


Description : Probable F-box protein At4g22030 OS=Arabidopsis thaliana (sp|o65451|fb333_arath : 136.0)


Gene families : OG_01_0001122 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001122_tree ,
OG_02_0000683 (LandPlants) Phylogenetic Tree(s): OG_02_0000683_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp5g17910.1
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00037390 evm_27.TU.AmTr_v1... Probable F-box protein At4g22030 OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00044p00128270 evm_27.TU.AmTr_v1... Probable F-box protein At4g22030 OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00044p00128640 evm_27.TU.AmTr_v1... Probable F-box protein At4g22030 OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00085p00174790 evm_27.TU.AmTr_v1... Probable F-box protein At4g22030 OS=Arabidopsis thaliana 0.02 Archaeplastida
AT4G04480 No alias unknown protein; LOCATED IN: chloroplast; EXPRESSED IN:... 0.05 Archaeplastida
AT4G22030 No alias F-box family protein with a domain of unknown function (DUF295) 0.02 Archaeplastida
GSVIVT01012688001 No alias Probable F-box protein At4g22030 OS=Arabidopsis thaliana 0.07 Archaeplastida
GSVIVT01012691001 No alias Probable F-box protein At4g22030 OS=Arabidopsis thaliana 0.04 Archaeplastida
Gb_15744 No alias Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.01 Archaeplastida
Gb_15745 No alias Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.01 Archaeplastida
Gb_15746 No alias Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.01 Archaeplastida
LOC_Os02g13220.1 No alias Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os02g28590.1 No alias no hits & (original description: none) 0.01 Archaeplastida
Mp5g00910.1 No alias Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Mp5g00950.1 No alias Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Mp5g01090.1 No alias Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Solyc02g080830.1.1 No alias Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.01 Archaeplastida
AMTR_s00001p00037390 evm_27.TU.AmTr_v1... Probable F-box protein At4g22030 OS=Arabidopsis thaliana 0.02 LandPlants
AMTR_s00044p00128270 evm_27.TU.AmTr_v1... Probable F-box protein At4g22030 OS=Arabidopsis thaliana 0.02 LandPlants
AMTR_s00044p00128640 evm_27.TU.AmTr_v1... Probable F-box protein At4g22030 OS=Arabidopsis thaliana 0.02 LandPlants
AMTR_s00067p00091510 evm_27.TU.AmTr_v1... Probable F-box protein At4g22030 OS=Arabidopsis thaliana 0.01 LandPlants
AT4G04480 No alias unknown protein; LOCATED IN: chloroplast; EXPRESSED IN:... 0.03 LandPlants
GSVIVT01012688001 No alias Probable F-box protein At4g22030 OS=Arabidopsis thaliana 0.05 LandPlants
GSVIVT01012691001 No alias Probable F-box protein At4g22030 OS=Arabidopsis thaliana 0.03 LandPlants
Gb_15744 No alias Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.01 LandPlants
Gb_15745 No alias Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.01 LandPlants
Gb_15746 No alias Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.01 LandPlants
LOC_Os02g13220.1 No alias Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.03 LandPlants
Mp5g00910.1 No alias Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.03 LandPlants
Mp5g00950.1 No alias Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.03 LandPlants
Mp5g01090.1 No alias Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.05 LandPlants
Solyc02g080830.1.1 No alias Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.01 LandPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR027949 Chloroplast_duf 129 431
No external refs found!