LOC_Os04g31900 (Os04g0388500)


Aliases : Os04g0388500

Description : 30.11 signalling.light Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains


Gene families : OG_01_0000629 (Gene family) Phylogenetic Tree(s): OG0000629_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os04g31900
Cluster HCCA cluster: Cluster_273

Target Alias Description ECC score Gene Family Method Actions
AT2G22300 CAMTA3, SR1 signal responsive 1 0.05 Gene family
AT5G64220 No alias Calmodulin-binding transcription activator protein with... 0.04 Gene family
GSVIVT01004860001 No alias 27.3.39 RNA.regulation of transcription.AtSR... 0.06 Gene family
GSVIVT01010510001 No alias 30.11 signalling.light Calmodulin-binding transcription... 0.04 Gene family
GSVIVT01017670001 No alias 27.3.39 RNA.regulation of transcription.AtSR... 0.06 Gene family
Smo441667 PACid_15409450 No description available 0.03 Gene family
Solyc01g105230.3.1 Solyc01g105230.3 27.3.39 RNA.regulation of transcription.AtSR... 0.06 Gene family
Solyc04g056270.3.1 Solyc04g056270.3 27.3.39 RNA.regulation of transcription.AtSR... 0.03 Gene family
Solyc05g015650.3.1 Solyc05g015650.3 30.11 signalling.light Calmodulin-binding transcription... 0.04 Gene family
Zm00001d014286 GRMZM2G341747 27.3.39 RNA.regulation of transcription.AtSR... 0.04 Gene family
Zm00001d022185 GRMZM2G017368 27.3.39 RNA.regulation of transcription.AtSR... 0.03 Gene family
Zm00001d030518 GRMZM2G153594 27.3.39 RNA.regulation of transcription.AtSR... 0.04 Gene family
Zm00001d042313 GRMZM2G171600 30.11 signalling.light Calmodulin-binding transcription... 0.02 Gene family
Zm00001d047209 GRMZM2G431243 27.3.39 RNA.regulation of transcription.AtSR... 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000048 IQ_motif_EF-hand-BS 884 904
IPR000048 IQ_motif_EF-hand-BS 862 880
IPR020683 Ankyrin_rpt-contain_dom 665 742
IPR005559 CG-1_dom 13 126
IPR002909 IPT_dom 451 532
No external refs found!