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  5. Mp1g18950.1

Mp1g18950.1


Description : Choline transporter protein 1 OS=Arabidopsis thaliana (sp|q94an2|cher1_arath : 644.0)


Gene families : OG0003269 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003269_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp1g18950.1
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
Ceric.26G054000.1 Ceric.26G054000 choline transporter *(CHER/CTL1) & original description:... 0.02 OrthoFinder output from all 47 species
MA_10431949g0010 No alias Choline transporter protein 1 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Solyc07g063230.3.1 Solyc07g063230 Choline transporter protein 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005337 nucleoside transmembrane transporter activity IEP HCCA
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP HCCA
BP GO:0015858 nucleoside transport IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:1901264 carbohydrate derivative transport IEP HCCA
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP HCCA
BP GO:1901642 nucleoside transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR007603 Choline_transptr-like 336 678
No external refs found!