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  5. Mp5g17510.1

Mp5g17510.1


Description : pri-miRNA recruitment factor (STV1). component RPL24 of LSU proteome component


Gene families : OG_01_0001838 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001838_tree ,
OG_02_0001764 (LandPlants) Phylogenetic Tree(s): OG_02_0001764_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp5g17510.1
Cluster HCCA: Cluster_98

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00095150 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.23 Archaeplastida
AMTR_s00119p00055300 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.21 Archaeplastida
AT2G36620 RPL24A ribosomal protein L24 0.35 Archaeplastida
AT3G53020 STV1, RPL24, RPL24B Ribosomal protein L24e family protein 0.37 Archaeplastida
Cpa|evm.model.tig00001093.9 No alias No description available 0.21 Archaeplastida
Cre09.g391097 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.27 Archaeplastida
GSVIVT01010601001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.24 Archaeplastida
GSVIVT01033743001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.1 Archaeplastida
GSVIVT01034676001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.12 Archaeplastida
Gb_07396 No alias pri-miRNA recruitment factor (STV1). component RPL24 of... 0.06 Archaeplastida
LOC_Os01g59990.1 No alias pri-miRNA recruitment factor (STV1). component RPL24 of... 0.25 Archaeplastida
LOC_Os07g12250.1 No alias pri-miRNA recruitment factor (STV1). component RPL24 of... 0.18 Archaeplastida
MA_137618g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_14639g0010 No alias pri-miRNA recruitment factor (STV1). component RPL24 of... 0.03 Archaeplastida
MA_6199g0020 No alias No annotation 0.09 Archaeplastida
Pp3c13_10770V3.1 No alias ribosomal protein L24 0.31 Archaeplastida
Pp3c1_16170V3.1 No alias ribosomal protein L24 0.28 Archaeplastida
Pp3c3_10840V3.1 No alias ribosomal protein L24 0.16 Archaeplastida
Pp3c3_8930V3.1 No alias Ribosomal protein L24e family protein 0.13 Archaeplastida
Pp3c4_25160V3.1 No alias ribosomal protein L24 0.15 Archaeplastida
Pp3c4_25170V3.1 No alias ribosomal protein L24 0.34 Archaeplastida
Smo438784 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 Archaeplastida
Solyc09g008800.3.1 No alias pri-miRNA recruitment factor (STV1). component RPL24 of... 0.33 Archaeplastida
Solyc10g083740.3.1 No alias pri-miRNA recruitment factor (STV1). component RPL24 of... 0.22 Archaeplastida
Solyc10g085480.2.1 No alias pri-miRNA recruitment factor (STV1). component RPL24 of... 0.07 Archaeplastida
Zm00001e004947_P001 No alias pri-miRNA recruitment factor (STV1). component RPL24 of... 0.34 Archaeplastida
Zm00001e012463_P004 No alias pri-miRNA recruitment factor (STV1). component RPL24 of... 0.3 Archaeplastida
Zm00001e027315_P001 No alias pri-miRNA recruitment factor (STV1). component RPL24 of... 0.14 Archaeplastida
AMTR_s00069p00095150 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.23 LandPlants
AMTR_s00119p00055300 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.21 LandPlants
AT2G36620 RPL24A ribosomal protein L24 0.35 LandPlants
AT3G53020 STV1, RPL24, RPL24B Ribosomal protein L24e family protein 0.36 LandPlants
GSVIVT01010601001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.23 LandPlants
GSVIVT01033743001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.09 LandPlants
GSVIVT01034676001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.12 LandPlants
Gb_07396 No alias pri-miRNA recruitment factor (STV1). component RPL24 of... 0.06 LandPlants
LOC_Os01g59990.1 No alias pri-miRNA recruitment factor (STV1). component RPL24 of... 0.24 LandPlants
LOC_Os07g12250.1 No alias pri-miRNA recruitment factor (STV1). component RPL24 of... 0.17 LandPlants
MA_14639g0010 No alias pri-miRNA recruitment factor (STV1). component RPL24 of... 0.02 LandPlants
MA_6199g0020 No alias No annotation 0.09 LandPlants
Pp3c13_10770V3.1 No alias ribosomal protein L24 0.31 LandPlants
Pp3c1_16170V3.1 No alias ribosomal protein L24 0.28 LandPlants
Pp3c3_10840V3.1 No alias ribosomal protein L24 0.16 LandPlants
Pp3c3_8930V3.1 No alias Ribosomal protein L24e family protein 0.13 LandPlants
Pp3c4_25160V3.1 No alias ribosomal protein L24 0.15 LandPlants
Pp3c4_25170V3.1 No alias ribosomal protein L24 0.34 LandPlants
Smo438784 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 LandPlants
Solyc09g008800.3.1 No alias pri-miRNA recruitment factor (STV1). component RPL24 of... 0.32 LandPlants
Solyc10g083740.3.1 No alias pri-miRNA recruitment factor (STV1). component RPL24 of... 0.22 LandPlants
Solyc10g085480.2.1 No alias pri-miRNA recruitment factor (STV1). component RPL24 of... 0.07 LandPlants
Zm00001e004947_P001 No alias pri-miRNA recruitment factor (STV1). component RPL24 of... 0.31 LandPlants
Zm00001e012463_P004 No alias pri-miRNA recruitment factor (STV1). component RPL24 of... 0.28 LandPlants
Zm00001e027315_P001 No alias pri-miRNA recruitment factor (STV1). component RPL24 of... 0.14 LandPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000988 Ribosomal_L24e-rel 4 67
No external refs found!