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Aliases : LIL3:1
Description : SEP3 LHC-related protein
Gene families : OG0002922 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002922_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Mp1g17030.1 | |
| Cluster | HCCA: Cluster_66 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT4G17600 | LIL3:1 | Chlorophyll A-B binding family protein | 0.14 | OrthoFinder output from all 47 species | |
| AT5G47110 | LIL3:2 | Chlorophyll A-B binding family protein | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g020993 | LIL3:1 | LHCII-stabilizing factor *(SEP3) & original description: none | 0.09 | OrthoFinder output from all 47 species | |
| Aev_g38602 | LIL3:1 | LHCII-stabilizing factor *(SEP3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g10014 | LIL3:1 | LHCII-stabilizing factor *(SEP3) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aob_g15592 | LIL3:1 | LHCII-stabilizing factor *(SEP3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g32557 | LIL3:1 | LHCII-stabilizing factor *(SEP3) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0002.g001642 | LIL3:1 | LHCII-stabilizing factor *(SEP3) & original description:... | 0.09 | OrthoFinder output from all 47 species | |
| Cba_g04415 | LIL3:1 | LHCII-stabilizing factor *(SEP3) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ceric.20G033200.1 | LIL3:1, Ceric.20G033200 | LHCII-stabilizing factor *(SEP3) & original description:... | 0.15 | OrthoFinder output from all 47 species | |
| Cre03.g199535 | LIL3:1 | Photosynthesis.photophosphorylation.photosystem... | 0.15 | OrthoFinder output from all 47 species | |
| Dac_g02634 | LIL3:1 | LHCII-stabilizing factor *(SEP3) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| GSVIVT01003693001 | LIL3:1 | Photosynthesis.photophosphorylation.photosystem... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_05189 | LIL3:1 | SEP3 LHC-related protein | 0.19 | OrthoFinder output from all 47 species | |
| LOC_Os02g03330.1 | LIL3:1, LOC_Os02g03330 | SEP3 LHC-related protein | 0.14 | OrthoFinder output from all 47 species | |
| MA_10427346g0010 | LIL3:1 | SEP3 LHC-related protein | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g25517 | LIL3:1 | LHCII-stabilizing factor *(SEP3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g08279 | LIL3:1 | LHCII-stabilizing factor *(SEP3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g15482 | LIL3:1 | LHCII-stabilizing factor *(SEP3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g28824 | LIL3:1 | LHCII-stabilizing factor *(SEP3) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Pnu_g26847 | LIL3:1 | LHCII-stabilizing factor *(SEP3) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Pp3c2_19700V3.1 | LIL3:1, Pp3c2_19700 | Chlorophyll A-B binding family protein | 0.09 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0065.g016040 | LIL3:1 | LHCII-stabilizing factor *(SEP3) & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g15171 | No alias | LHCII-stabilizing factor *(SEP3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo106498 | LIL3:1 | Photosynthesis.photophosphorylation.photosystem... | 0.1 | OrthoFinder output from all 47 species | |
| Solyc08g007180.3.1 | LIL3:1, Solyc08g007180 | SEP3 LHC-related protein | 0.08 | OrthoFinder output from all 47 species | |
| Solyc08g077880.3.1 | LIL3:1, Solyc08g077880 | SEP3 LHC-related protein | 0.13 | OrthoFinder output from all 47 species | |
| Spa_g16684 | LIL3:1 | LHCII-stabilizing factor *(SEP3) & original description: none | 0.09 | OrthoFinder output from all 47 species | |
| Spa_g16685 | LIL3:1 | LHCII-stabilizing factor *(SEP3) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e013528_P001 | LIL3:1, Zm00001e013528 | SEP3 LHC-related protein | 0.13 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0004418 | hydroxymethylbilane synthase activity | IEP | HCCA |
| MF | GO:0004853 | uroporphyrinogen decarboxylase activity | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006457 | protein folding | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006779 | porphyrin-containing compound biosynthetic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | HCCA |
| MF | GO:0016831 | carboxy-lyase activity | IEP | HCCA |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| MF | GO:0019843 | rRNA binding | IEP | HCCA |
| BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | HCCA |
| BP | GO:0033013 | tetrapyrrole metabolic process | IEP | HCCA |
| BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0042254 | ribosome biogenesis | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0044085 | cellular component biogenesis | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |