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  5. Mp1g16700.1

Mp1g16700.1


Description : scaffolding component CKS of cyclin-dependent kinase complex


Gene families : OG0002701 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002701_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp1g16700.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00140p00038880 evm_27.TU.AmTr_v1... Cell cycle.regulation.cyclin-dependent kinase... 0.05 OrthoFinder output from all 47 species
AT2G27970 CKS2 CDK-subunit 2 0.03 OrthoFinder output from all 47 species
Adi_g048990 CKS1AT, CKS1 scaffold component *(CKS) of cyclin-dependent kinase... 0.02 OrthoFinder output from all 47 species
Aev_g22486 CKS1AT, CKS1 scaffold component *(CKS) of cyclin-dependent kinase... 0.01 OrthoFinder output from all 47 species
Als_g05346 CKS1AT, CKS1 scaffold component *(CKS) of cyclin-dependent kinase... 0.02 OrthoFinder output from all 47 species
Als_g26996 CKS1AT, CKS1 scaffold component *(CKS) of cyclin-dependent kinase... 0.05 OrthoFinder output from all 47 species
Aop_g22173 CKS2 scaffold component *(CKS) of cyclin-dependent kinase... 0.03 OrthoFinder output from all 47 species
Azfi_s0228.g059060 No alias scaffold component *(CKS) of cyclin-dependent kinase... 0.04 OrthoFinder output from all 47 species
Ceric.20G054400.1 CKS1AT, CKS1,... scaffold component *(CKS) of cyclin-dependent kinase... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020780.5 No alias Cell cycle.regulation.cyclin-dependent kinase... 0.01 OrthoFinder output from all 47 species
Cre03.g180350 No alias Cell cycle.regulation.cyclin-dependent kinase... 0.03 OrthoFinder output from all 47 species
Dac_g26714 CKS2 scaffold component *(CKS) of cyclin-dependent kinase... 0.07 OrthoFinder output from all 47 species
Dde_g23860 CKS2 scaffold component *(CKS) of cyclin-dependent kinase... 0.03 OrthoFinder output from all 47 species
Dde_g25426 CKS1AT, CKS1 scaffold component *(CKS) of cyclin-dependent kinase... 0.02 OrthoFinder output from all 47 species
Gb_39695 CKS1AT, CKS1 scaffolding component CKS of cyclin-dependent kinase complex 0.14 OrthoFinder output from all 47 species
LOC_Os03g05300.1 LOC_Os03g05300 scaffolding component CKS of cyclin-dependent kinase complex 0.08 OrthoFinder output from all 47 species
Len_g41049 CKS1AT, CKS1 scaffold component *(CKS) of cyclin-dependent kinase... 0.02 OrthoFinder output from all 47 species
Lfl_g40067 CKS1AT, CKS1 scaffold component *(CKS) of cyclin-dependent kinase... 0.04 OrthoFinder output from all 47 species
MA_156774g0010 CKS1AT, CKS1 scaffolding component CKS of cyclin-dependent kinase complex 0.03 OrthoFinder output from all 47 species
MA_364061g0010 CKS1AT, CKS1 scaffolding component CKS of cyclin-dependent kinase complex 0.05 OrthoFinder output from all 47 species
MA_475176g0010 CKS2 scaffolding component CKS of cyclin-dependent kinase complex 0.04 OrthoFinder output from all 47 species
Msp_g29168 CKS1AT, CKS1 scaffold component *(CKS) of cyclin-dependent kinase... 0.02 OrthoFinder output from all 47 species
Nbi_g08553 CKS2 scaffold component *(CKS) of cyclin-dependent kinase... 0.02 OrthoFinder output from all 47 species
Nbi_g23237 CKS1AT, CKS1 scaffold component *(CKS) of cyclin-dependent kinase... 0.02 OrthoFinder output from all 47 species
Pir_g21426 CKS2 scaffold component *(CKS) of cyclin-dependent kinase... 0.03 OrthoFinder output from all 47 species
Pir_g65792 CKS2 scaffold component *(CKS) of cyclin-dependent kinase... 0.01 OrthoFinder output from all 47 species
Pp3c2_6200V3.1 Pp3c2_6200 CDK-subunit 2 0.03 OrthoFinder output from all 47 species
Sam_g26303 No alias scaffold component *(CKS) of cyclin-dependent kinase... 0.01 OrthoFinder output from all 47 species
Spa_g48395 CKS1AT, CKS1 scaffold component *(CKS) of cyclin-dependent kinase... 0.09 OrthoFinder output from all 47 species
Tin_g18395 CKS1AT, CKS1 scaffold component *(CKS) of cyclin-dependent kinase... 0.03 OrthoFinder output from all 47 species
Tin_g28369 CKS2 scaffold component *(CKS) of cyclin-dependent kinase... 0.03 OrthoFinder output from all 47 species
Zm00001e000375_P001 CKS1AT, CKS1,... scaffolding component CKS of cyclin-dependent kinase complex 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
InterPro domains Description Start Stop
IPR000789 Cyclin-dep_kinase_reg-sub 4 70
No external refs found!