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  5. Mp1g16490.1

Mp1g16490.1


Description : component RRP40 of exosome EXO9 core complex


Gene families : OG0006314 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006314_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp1g16490.1
Cluster HCCA: Cluster_64

Target Alias Description ECC score Gene Family Method Actions
AT2G25355 No alias PNAS-3 related 0.02 OrthoFinder output from all 47 species
Aev_g06373 No alias component *(RRP40) of exosome EXO9 core complex &... 0.02 OrthoFinder output from all 47 species
Aop_g11746 No alias component *(RRP40) of exosome EXO9 core complex &... 0.02 OrthoFinder output from all 47 species
Cba_g31389 No alias component *(RRP40) of exosome EXO9 core complex &... 0.02 OrthoFinder output from all 47 species
Cre07.g319900 No alias RNA processing.RNA decay.exosome complex.EXO9 core... 0.03 OrthoFinder output from all 47 species
Dde_g41594 No alias component *(RRP40) of exosome EXO9 core complex &... 0.02 OrthoFinder output from all 47 species
LOC_Os01g47256.4 LOC_Os01g47256 component RRP40 of exosome EXO9 core complex 0.02 OrthoFinder output from all 47 species
MA_473706g0010 No alias component RRP40 of exosome EXO9 core complex 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0080.g017957 No alias component *(RRP40) of exosome EXO9 core complex &... 0.02 OrthoFinder output from all 47 species
Solyc06g071460.3.1 Solyc06g071460 component RRP40 of exosome EXO9 core complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR041054 Rrp40_N 34 73
IPR004088 KH_dom_type_1 161 209
No external refs found!