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  5. Mp1g13640.1

Mp1g13640.1


Description : transcription factor (SBP)


Gene families : OG0001309 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001309_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp1g13640.1
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00106940 SPL1R2, ATSPL14,... RNA biosynthesis.transcriptional activation.SBP... 0.03 OrthoFinder output from all 47 species
Adi_g025056 SPL12 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g075897 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g099813 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g113317 SPL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g113329 SPL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g125517 SPL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g06793 No alias SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07275 SPL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g29191 SPL1R2, ATSPL14,... SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g31923 SPL1R2, ATSPL14,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g05362 SPL1 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g08355 No alias SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34071.t2 SPL1R2, ATSPL14,... SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0033.g025109 SPL12 SBP-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Azfi_s0308.g064040 SPL1 SBP-type transcription factor & original description:... 0.05 OrthoFinder output from all 47 species
Cba_g31507 SPL12 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.01G021200.1 Ceric.01G021200 SBP-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.03G050900.1 Ceric.03G050900 SBP-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ehy_g05078 SPL1 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01013452001 SPL1R2, ATSPL14,... RNA biosynthesis.transcriptional activation.SBP... 0.06 OrthoFinder output from all 47 species
Gb_00228 SPL1 transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
Gb_37539 SPL1R2, ATSPL14,... transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Gb_41517 No alias transcription factor (SBP) 0.04 OrthoFinder output from all 47 species
LOC_Os01g18850.1 SPL1, LOC_Os01g18850 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
LOC_Os08g40260.1 LOC_Os08g40260 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Len_g50902 SPL1 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
MA_10427464g0010 No alias transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Msp_g13600 SPL1R2, ATSPL14,... SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g36989 SPL1R2, ATSPL14,... SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g02484 SPL1 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g08132 SPL1 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g26886 SPL1 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0025.g009405 SPL12 SBP-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0093.g019102 SPL1 SBP-type transcription factor & original description: CDS=1-3150 0.02 OrthoFinder output from all 47 species
Sam_g39394 No alias SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g51231 No alias SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Smo437670 SPL1 RNA biosynthesis.transcriptional activation.SBP... 0.03 OrthoFinder output from all 47 species
Solyc01g068100.4.1 SPL1, Solyc01g068100 Squamosa promoter-binding-like protein 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Spa_g26324 SPL1 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g49449 No alias SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g52595 SPL1R2, ATSPL14,... SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e003571_P002 Zm00001e003571 transcription factor (SBP) 0.05 OrthoFinder output from all 47 species
Zm00001e006252_P001 SPL1, Zm00001e006252 transcription factor (SBP) 0.06 OrthoFinder output from all 47 species
Zm00001e011712_P002 SPL1, Zm00001e011712 transcription factor (SBP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0042025 host cell nucleus IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007030 Golgi organization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR004333 SBP_dom 210 283
No external refs found!