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  5. Mp1g11600.1

Mp1g11600.1


Description : NUP75/85 scaffold nucleoporin of nuclear pore complex


Gene families : OG0004258 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004258_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp1g11600.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00056p00051320 evm_27.TU.AmTr_v1... Protein translocation.nucleus.nucleocytoplasmic... 0.02 OrthoFinder output from all 47 species
AT4G32910 No alias CONTAINS InterPro DOMAIN/s: Nuclear pore complex... 0.02 OrthoFinder output from all 47 species
Als_g02552 No alias scaffold nucleoporin of nuclear pore complex *(NUP75/85)... 0.02 OrthoFinder output from all 47 species
Aspi01Gene72960.t1 Aspi01Gene72960 scaffold nucleoporin of nuclear pore complex *(NUP75/85)... 0.02 OrthoFinder output from all 47 species
Ceric.05G088400.1 Ceric.05G088400 scaffold nucleoporin of nuclear pore complex *(NUP75/85)... 0.05 OrthoFinder output from all 47 species
Cre08.g383650 No alias No description available 0.05 OrthoFinder output from all 47 species
LOC_Os01g54240.1 LOC_Os01g54240 NUP75/85 scaffold nucleoporin of nuclear pore complex 0.07 OrthoFinder output from all 47 species
Msp_g07563 No alias scaffold nucleoporin of nuclear pore complex *(NUP75/85)... 0.02 OrthoFinder output from all 47 species
Ore_g22939 No alias scaffold nucleoporin of nuclear pore complex *(NUP75/85)... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0331.g027262 No alias scaffold nucleoporin of nuclear pore complex *(NUP75/85)... 0.02 OrthoFinder output from all 47 species
Solyc08g066580.4.1 Solyc08g066580 NUP75/85 scaffold nucleoporin of nuclear pore complex 0.08 OrthoFinder output from all 47 species
Tin_g06661 No alias scaffold nucleoporin of nuclear pore complex *(NUP75/85)... 0.03 OrthoFinder output from all 47 species
Zm00001e019793_P001 Zm00001e019793 NUP75/85 scaffold nucleoporin of nuclear pore complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000149 SNARE binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
BP GO:0006480 N-terminal protein amino acid methylation IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
MF GO:0019905 syntaxin binding IEP HCCA
BP GO:0031365 N-terminal protein amino acid modification IEP HCCA
BP GO:0032259 methylation IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0043015 gamma-tubulin binding IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR011502 Nucleoporin_Nup85 93 689
No external refs found!