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  5. Mp1g10290.1

Mp1g10290.1 (EMB2016)


Aliases : EMB2016

Description : regulatory component VIR of adenosine N6-methyltransferase complex


Gene families : OG0007626 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007626_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp1g10290.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00079350 EMB2016,... RNA processing.RNA modification.mRNA... 0.03 OrthoFinder output from all 47 species
AT3G05680 EMB2016 embryo defective 2016 0.03 OrthoFinder output from all 47 species
Adi_g117188 EMB2016 regulatory component *(VIR) of adenosine... 0.03 OrthoFinder output from all 47 species
Aev_g20810 EMB2016 regulatory component *(VIR) of adenosine... 0.03 OrthoFinder output from all 47 species
Ala_g07640 EMB2016 regulatory component *(VIR) of adenosine... 0.03 OrthoFinder output from all 47 species
Als_g16425 EMB2016 regulatory component *(VIR) of adenosine... 0.01 OrthoFinder output from all 47 species
Aob_g21900 EMB2016 regulatory component *(VIR) of adenosine... 0.02 OrthoFinder output from all 47 species
Aop_g09034 EMB2016 regulatory component *(VIR) of adenosine... 0.03 OrthoFinder output from all 47 species
Aspi01Gene70942.t1 EMB2016, Aspi01Gene70942 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g12918 EMB2016 regulatory component *(VIR) of adenosine... 0.02 OrthoFinder output from all 47 species
Dcu_g34300 EMB2016 regulatory component *(VIR) of adenosine... 0.03 OrthoFinder output from all 47 species
GSVIVT01020162001 EMB2016 RNA processing.RNA modification.mRNA... 0.04 OrthoFinder output from all 47 species
LOC_Os03g35340.1 EMB2016, LOC_Os03g35340 regulatory component VIR of adenosine... 0.04 OrthoFinder output from all 47 species
Len_g19134 EMB2016 regulatory component *(VIR) of adenosine... 0.03 OrthoFinder output from all 47 species
Lfl_g12938 EMB2016 regulatory component *(VIR) of adenosine... 0.06 OrthoFinder output from all 47 species
MA_10427076g0010 EMB2016 no description available(sp|f4j8g7|vir_arath : 177.0) 0.03 OrthoFinder output from all 47 species
Pir_g16072 EMB2016 regulatory component *(VIR) of adenosine... 0.02 OrthoFinder output from all 47 species
Pnu_g13801 EMB2016 regulatory component *(VIR) of adenosine... 0.02 OrthoFinder output from all 47 species
Ppi_g08793 EMB2016 regulatory component *(VIR) of adenosine... 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0032.g010851 EMB2016 regulatory component *(VIR) of adenosine... 0.02 OrthoFinder output from all 47 species
Sam_g18026 No alias regulatory component *(VIR) of adenosine... 0.01 OrthoFinder output from all 47 species
Solyc03g020020.3.1 EMB2016, Solyc03g020020 regulatory component VIR of adenosine... 0.07 OrthoFinder output from all 47 species
Spa_g21962 EMB2016 regulatory component *(VIR) of adenosine... 0.03 OrthoFinder output from all 47 species
Zm00001e012524_P001 EMB2016, Zm00001e012524 regulatory component VIR of adenosine... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0060090 molecular adaptor activity IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
InterPro domains Description Start Stop
IPR031801 VIR_N 6 120
No external refs found!