Description : regulatory component RPN7 of 26S proteasome
Gene families : OG0004513 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004513_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Mp1g10100.1 | |
Cluster | HCCA: Cluster_3 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT4G24820 | No alias | 26S proteasome, regulatory subunit Rpn7;Proteasome... | 0.15 | OrthoFinder output from all 47 species | |
Ala_g01282 | No alias | regulatory component *(RPN7) of 26S proteasome &... | 0.02 | OrthoFinder output from all 47 species | |
Als_g13037 | No alias | regulatory component *(RPN7) of 26S proteasome &... | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene68842.t1 | Aspi01Gene68842 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Cba_g10280 | No alias | regulatory component *(RPN7) of 26S proteasome &... | 0.02 | OrthoFinder output from all 47 species | |
Ceric.15G063400.1 | Ceric.15G063400 | regulatory component *(RPN7) of 26S proteasome &... | 0.03 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00000615.75 | No alias | Protein degradation.26S proteasome.regulatory... | 0.08 | OrthoFinder output from all 47 species | |
Cre13.g581450 | No alias | Protein degradation.26S proteasome.regulatory... | 0.23 | OrthoFinder output from all 47 species | |
Dcu_g08722 | No alias | regulatory component *(RPN7) of 26S proteasome &... | 0.08 | OrthoFinder output from all 47 species | |
GSVIVT01007538001 | No alias | Protein degradation.26S proteasome.regulatory... | 0.06 | OrthoFinder output from all 47 species | |
Gb_07144 | No alias | regulatory component RPN7 of 26S proteasome | 0.07 | OrthoFinder output from all 47 species | |
LOC_Os04g40850.1 | LOC_Os04g40850 | regulatory component RPN7 of 26S proteasome | 0.06 | OrthoFinder output from all 47 species | |
MA_10428103g0010 | No alias | regulatory component RPN7 of 26S proteasome | 0.03 | OrthoFinder output from all 47 species | |
Smo146093 | No alias | Protein degradation.26S proteasome.regulatory... | 0.05 | OrthoFinder output from all 47 species | |
Solyc07g009140.3.1 | Solyc07g009140 | regulatory component RPN7 of 26S proteasome | 0.11 | OrthoFinder output from all 47 species | |
Spa_g50785 | No alias | regulatory component *(RPN7) of 26S proteasome &... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e007775_P001 | Zm00001e007775 | regulatory component RPN7 of 26S proteasome | 0.11 | OrthoFinder output from all 47 species | |
Zm00001e015028_P002 | Zm00001e015028 | regulatory component RPN7 of 26S proteasome | 0.19 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | HCCA |
MF | GO:0003674 | molecular_function | IEP | HCCA |
MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
MF | GO:0004298 | threonine-type endopeptidase activity | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
MF | GO:0005524 | ATP binding | IEP | HCCA |
CC | GO:0005575 | cellular_component | IEP | HCCA |
CC | GO:0005839 | proteasome core complex | IEP | HCCA |
BP | GO:0006508 | proteolysis | IEP | HCCA |
BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | HCCA |
MF | GO:0008233 | peptidase activity | IEP | HCCA |
BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
MF | GO:0016787 | hydrolase activity | IEP | HCCA |
MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
BP | GO:0019538 | protein metabolic process | IEP | HCCA |
CC | GO:0019773 | proteasome core complex, alpha-subunit complex | IEP | HCCA |
BP | GO:0019941 | modification-dependent protein catabolic process | IEP | HCCA |
MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
CC | GO:0032991 | protein-containing complex | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
MF | GO:0036094 | small molecule binding | IEP | HCCA |
MF | GO:0043167 | ion binding | IEP | HCCA |
MF | GO:0043168 | anion binding | IEP | HCCA |
BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | HCCA |
BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | HCCA |
MF | GO:0070003 | threonine-type peptidase activity | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
CC | GO:1902494 | catalytic complex | IEP | HCCA |
No external refs found! |