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  5. Mp1g09470.1

Mp1g09470.1 (MED33A, RFR1)


Aliases : MED33A, RFR1

Description : component MED5/MED24/MED33 of tail module of MEDIATOR transcription co-activator complex


Gene families : OG0004136 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004136_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp1g09470.1
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
Adi_g023685 MED33A, RFR1 component *(MED5/MED24/MED33) of tail module of MEDIATOR... 0.02 OrthoFinder output from all 47 species
Als_g61525 MED33A, RFR1 component *(MED5/MED24/MED33) of tail module of MEDIATOR... 0.02 OrthoFinder output from all 47 species
Aop_g59081 MED33A, RFR1 component *(MED5/MED24/MED33) of tail module of MEDIATOR... 0.02 OrthoFinder output from all 47 species
Dac_g21888 MED33A, RFR1 component *(MED5/MED24/MED33) of tail module of MEDIATOR... 0.02 OrthoFinder output from all 47 species
LOC_Os07g48350.1 MED33A, RFR1,... component MED5/MED24/MED33 of tail module of MEDIATOR... 0.01 OrthoFinder output from all 47 species
Ore_g35586 MED33A, RFR1 component *(MED5/MED24/MED33) of tail module of MEDIATOR... 0.03 OrthoFinder output from all 47 species
Tin_g14540 MED33A, RFR1 component *(MED5/MED24/MED33) of tail module of MEDIATOR... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
BP GO:0016482 cytosolic transport IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017150 tRNA dihydrouridine synthase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
CC GO:0030906 retromer, cargo-selective complex IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042147 retrograde transport, endosome to Golgi IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0106413 dihydrouridine synthase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!