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  5. Mp1g06170.1

Mp1g06170.1


Description : component RPP0 of LSU proteome component


Gene families : OG0002053 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002053_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp1g06170.1

Target Alias Description ECC score Gene Family Method Actions
AT3G09200 No alias Ribosomal protein L10 family protein 0.04 OrthoFinder output from all 47 species
AT3G11250 No alias Ribosomal protein L10 family protein 0.03 OrthoFinder output from all 47 species
Adi_g013157 No alias component *(uL10) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000615.69 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
Cre12.g520500 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
Dcu_g00958 No alias component *(uL10) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
GSVIVT01016313001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
GSVIVT01032857001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
LOC_Os08g03640.1 LOC_Os08g03640 component RPP0 of LSU proteome component 0.02 OrthoFinder output from all 47 species
LOC_Os12g03880.1 LOC_Os12g03880 component RPP0 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Len_g16154 No alias component *(uL10) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Pp3c1_8280V3.1 Pp3c1_8280 Ribosomal protein L10 family protein 0.04 OrthoFinder output from all 47 species
Sam_g09753 No alias component *(uL10) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Sam_g09883 No alias component *(uL10) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Solyc05g054580.3.1 Solyc05g054580 component RPP0 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Spa_g56101 No alias component *(uL10) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Zm00001e021786_P001 Zm00001e021786 component RPP0 of LSU proteome component 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0042254 ribosome biogenesis IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001790 Ribosomal_L10P 7 108
IPR040637 RL10P_insert 114 183
No external refs found!