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  5. Mp1g05910.1

Mp1g05910.1


Description : no hits & (original description: none)


Gene families : OG0005591 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005591_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp1g05910.1

Target Alias Description ECC score Gene Family Method Actions
Aob_g17502 No alias component *(NOT11) of mRNA deadenylation CCR4-NOT... 0.01 OrthoFinder output from all 47 species
Aop_g21732 No alias component *(NOT11) of mRNA deadenylation CCR4-NOT... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020610.97 No alias No description available 0.02 OrthoFinder output from all 47 species
Dac_g37030 No alias component *(NOT11) of mRNA deadenylation CCR4-NOT... 0.02 OrthoFinder output from all 47 species
Dcu_g05481 No alias component *(NOT11) of mRNA deadenylation CCR4-NOT... 0.02 OrthoFinder output from all 47 species
GSVIVT01000257001 No alias No description available 0.02 OrthoFinder output from all 47 species
LOC_Os11g13694.1 LOC_Os11g13694 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os12g09610.1 LOC_Os12g09610 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e011041_P003 Zm00001e011041 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0030014 CCR4-NOT complex IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006488 dolichol-linked oligosaccharide biosynthetic process IEP HCCA
BP GO:0006490 oligosaccharide-lipid intermediate biosynthetic process IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0051011 microtubule minus-end binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0070403 NAD+ binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR019312 CNOT11 302 426
No external refs found!