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  5. Mp1g05630.1

Mp1g05630.1


Description : CG1 nucleoporin of nuclear pore complex


Gene families : OG0005874 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005874_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp1g05630.1

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0013.g013311 No alias nucleoporin of nuclear pore complex *(CG1) & original... 0.03 OrthoFinder output from all 47 species
Solyc12g009390.2.1 Solyc12g009390 CG1 nucleoporin of nuclear pore complex 0.04 OrthoFinder output from all 47 species
Zm00001e013202_P001 Zm00001e013202 CG1 nucleoporin of nuclear pore complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006302 double-strand break repair IEP HCCA
BP GO:0006303 double-strand break repair via nonhomologous end joining IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 5 26
No external refs found!