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  5. Mp1g04130.1

Mp1g04130.1 (PSRP4)


Aliases : PSRP4

Description : component psPSRP4 of small ribosomal subunit proteome


Gene families : OG0003575 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003575_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp1g04130.1
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00235620 PSRP4,... Protein biosynthesis.organelle translation... 0.03 OrthoFinder output from all 47 species
AT2G38140 PSRP4 plastid-specific ribosomal protein 4 0.18 OrthoFinder output from all 47 species
Ala_g00113 PSRP4 component *(bTHXc) of small plastid ribosomal-subunit... 0.13 OrthoFinder output from all 47 species
Als_g33915 PSRP4 component *(bTHXc) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Aob_g07535 PSRP4 component *(bTHXc) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Aop_g00094 PSRP4 component *(bTHXc) of small plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Azfi_s0035.g025463 PSRP4 component *(bTHXc) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Cba_g05525 PSRP4 component *(bTHXc) of small plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Ceric.36G025700.1 PSRP4, Ceric.36G025700 component *(bTHXc) of small plastid ribosomal-subunit... 0.18 OrthoFinder output from all 47 species
Dac_g00361 PSRP4 component *(bTHXc) of small plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Ehy_g30276 PSRP4 component *(bTHXc) of small plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
LOC_Os05g09400.1 PSRP4, LOC_Os05g09400 no hits & (original description: none) 0.14 OrthoFinder output from all 47 species
Len_g02488 PSRP4 component *(bTHXc) of small plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Lfl_g05135 PSRP4 component *(bTHXc) of small plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
MA_202598g0010 PSRP4 component psPSRP4 of small ribosomal subunit proteome 0.12 OrthoFinder output from all 47 species
Msp_g01793 PSRP4 component *(bTHXc) of small plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Ore_g00050 PSRP4 component *(bTHXc) of small plastid ribosomal-subunit... 0.08 OrthoFinder output from all 47 species
Pir_g00298 PSRP4 component *(bTHXc) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Ppi_g04757 PSRP4 component *(bTHXc) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0128.g021882 PSRP4 component *(bTHXc) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Sam_g47706 No alias component *(bTHXc) of small plastid ribosomal-subunit... 0.09 OrthoFinder output from all 47 species
Solyc05g052710.3.1 PSRP4, Solyc05g052710 component psPSRP4 of small ribosomal subunit proteome 0.04 OrthoFinder output from all 47 species
Spa_g22458 PSRP4 component *(bTHXc) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Spa_g46754 PSRP4 component *(bTHXc) of small plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Zm00001e018923_P004 PSRP4, Zm00001e018923 component psPSRP4 of small ribosomal subunit proteome 0.11 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005840 ribosome IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR030826 Ribo_THX 8 92
No external refs found!