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  5. Mp1g03870.1

Mp1g03870.1 (ATRAB8D, ATRABE1B, RABE1b)


Aliases : ATRAB8D, ATRABE1B, RABE1b

Description : EF-Tu translation elongation factor


Gene families : OG0001305 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001305_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp1g03870.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00115820 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.02 OrthoFinder output from all 47 species
AMTR_s00049p00227880 ATRAB8D,... Protein biosynthesis.organelle translation... 0.05 OrthoFinder output from all 47 species
AT4G02930 No alias GTP binding Elongation factor Tu family protein 0.02 OrthoFinder output from all 47 species
AT4G20360 ATRAB8D, ATRABE1B, RABE1b RAB GTPase homolog E1B 0.17 OrthoFinder output from all 47 species
Adi_g075285 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.04 OrthoFinder output from all 47 species
Aev_g21041 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.06 OrthoFinder output from all 47 species
Aev_g27656 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.06 OrthoFinder output from all 47 species
Ala_g04793 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.04 OrthoFinder output from all 47 species
Als_g08146 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.11 OrthoFinder output from all 47 species
Als_g08147 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.05 OrthoFinder output from all 47 species
Als_g09356 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.04 OrthoFinder output from all 47 species
Als_g23756 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.05 OrthoFinder output from all 47 species
Aob_g15070 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.03 OrthoFinder output from all 47 species
Aop_g10494 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.03 OrthoFinder output from all 47 species
Aop_g25435 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene10728.t1 ATRAB8D,... translation elongation factor *(EF-Tu) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene22120.t1 ATRAB8D,... translation elongation factor *(EF-Tu) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene33545.t1 ATRAB8D,... translation elongation factor *(EF-Tu) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene36272.t1 ATRAB8D,... translation elongation factor *(EF-Tu) & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0292.g063375 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.04 OrthoFinder output from all 47 species
Cba_g05793 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.02 OrthoFinder output from all 47 species
Cba_g06908 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.06 OrthoFinder output from all 47 species
Cba_g22191 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.07 OrthoFinder output from all 47 species
Cba_g70878 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.05 OrthoFinder output from all 47 species
Ceric.10G078000.1 ATRAB8D,... translation elongation factor *(EF-Tu) & original... 0.08 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021127.40 No alias Protein biosynthesis.organelle translation... 0.02 OrthoFinder output from all 47 species
Dac_g02773 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.06 OrthoFinder output from all 47 species
Dcu_g08765 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.03 OrthoFinder output from all 47 species
Dde_g18792 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.07 OrthoFinder output from all 47 species
Ehy_g09796 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01007638001 ATRAB8D, ATRABE1B, RABE1b Protein biosynthesis.organelle translation... 0.03 OrthoFinder output from all 47 species
Gb_29040 ATRAB8D, ATRABE1B, RABE1b EF-Tu translation elongation factor 0.07 OrthoFinder output from all 47 species
LOC_Os02g38210.1 ATRAB8D,... EF-Tu translation elongation factor 0.12 OrthoFinder output from all 47 species
Len_g22333 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.07 OrthoFinder output from all 47 species
Len_g22334 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.06 OrthoFinder output from all 47 species
Len_g31034 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.04 OrthoFinder output from all 47 species
Len_g39684 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.09 OrthoFinder output from all 47 species
Len_g41947 ATRAB8D, ATRABE1B, RABE1b not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g06070 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.02 OrthoFinder output from all 47 species
MA_942991g0010 ATRAB8D, ATRABE1B, RABE1b EF-Tu translation elongation factor 0.06 OrthoFinder output from all 47 species
Msp_g05929 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.01 OrthoFinder output from all 47 species
Msp_g11454 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.05 OrthoFinder output from all 47 species
Nbi_g01170 No alias translation elongation factor *(EF-Tu) & original... 0.02 OrthoFinder output from all 47 species
Nbi_g13791 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.08 OrthoFinder output from all 47 species
Nbi_g14071 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.03 OrthoFinder output from all 47 species
Pir_g05476 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.04 OrthoFinder output from all 47 species
Pnu_g24392 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.04 OrthoFinder output from all 47 species
Pnu_g24394 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.09 OrthoFinder output from all 47 species
Pp3c1_38670V3.1 ATRAB8D,... RAB GTPase homolog E1B 0.02 OrthoFinder output from all 47 species
Ppi_g34741 ATRAB8D, ATRABE1B, RABE1b not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0062.g015523 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.07 OrthoFinder output from all 47 species
Sam_g07638 No alias translation elongation factor *(EF-Tu) & original... 0.05 OrthoFinder output from all 47 species
Smo233481 ATRAB8D, ATRABE1B, RABE1b Protein biosynthesis.organelle translation... 0.06 OrthoFinder output from all 47 species
Solyc03g112150.1.1 ATRAB8D,... EF-Tu translation elongation factor 0.12 OrthoFinder output from all 47 species
Solyc06g071790.3.1 ATRAB8D,... EF-Tu translation elongation factor 0.17 OrthoFinder output from all 47 species
Spa_g10864 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.03 OrthoFinder output from all 47 species
Spa_g10865 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.07 OrthoFinder output from all 47 species
Spa_g18775 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.02 OrthoFinder output from all 47 species
Spa_g50677 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.06 OrthoFinder output from all 47 species
Tin_g03978 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.02 OrthoFinder output from all 47 species
Tin_g05984 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.05 OrthoFinder output from all 47 species
Zm00001e015008_P001 ATRAB8D,... EF-Tu translation elongation factor 0.03 OrthoFinder output from all 47 species
Zm00001e022880_P001 ATRAB8D,... EF-Tu translation elongation factor 0.19 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004751 ribose-5-phosphate isomerase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009536 plastid IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004161 EFTu-like_2 314 382
IPR000795 T_Tr_GTP-bd_dom 89 290
IPR004160 Transl_elong_EFTu/EF1A_C 387 486
No external refs found!